Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq221 105 1e-17
seq169 84.2 5e-11
>seq221
Length=98460
Score = 105 bits (116), Expect = 1e-17
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 243500 AAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCC 243559
|||| ||||| || || ||| | || |||| ||| || || ||| | || ||
Sbjct 72372 AAATTATCACCGATGCCGTTACCATTGAGCAGGAGTTCCTTACTGAGGCTCTCCCTTGTG 72431
Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619
|| | ||||||||||| | |||||| ||||||||||| ||||| || || ||
Sbjct 72432 CTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCTGATCGTC 72491
Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679
| || |||| || || | ||||| |||||||| | | |||||||| | ||| ||||
Sbjct 72492 TCCTCGTCGCTCTCGGCAACGAGAAGGTGTACAAGGCTACCAACCCCTTCGACTTCATGG 72551
Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| ||| || ||| || || || ||||||||||| ||||||||
Sbjct 72552 AGAACATCTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 72597
>seq169
Length=232921
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||| |||| || |||||||| || || || || || | ||
Sbjct 54895 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACC 54836
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || || |||||||| || | |||||||| ||| || | || | ||| ||
Sbjct 54835 GTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGACGGAGGTGAGTCTGGTTGAG 54776
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|||||| || |||| || || ||||| || ||| | || |||||||||||
Sbjct 54775 AAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 54722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873203157350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |