Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq51 197 2e-45 >seq51 Length=398837 Score = 197 bits (218), Expect = 2e-45 Identities = 1065/1684 (63%), Gaps = 45/1684 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| ||||| || |||| || |||||||||||||| || |||||||| | Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||||| || | ||||| || | |||| | ||| || | |||| Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 | ||| | | || || || ||||||||| ||||| ||||| ||||| | || Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCT---GCA 42344 Query 113745 CATCCTTCATCT---TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801 || ||| || || ||||||||||| |||| || ||| ||||| | |||| Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404 Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 | | ||| || ||||| || ||||| | | || | | ||||||| | | | Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGC---TTATTGACAACAACAAACT 113918 |||| ||||| || | ||||||| |||| || |||||||| |||| Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCT---TGAGAAGCCAGGGGTTGACAACTTGGAACT 42521 Query 113919 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 113978 | || || ||| || | | ||||| |||| ||||| ||||| |||||||| |||| Sbjct 42522 CGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGT 42581 Query 113979 TACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038 | || | || || | ||| || |||||||| || || | ||| || ||||| |||| Sbjct 42582 TGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGA 42641 Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTC 114096 ||| | | | | || ||| | ||||| | | || | || | || Sbjct 42642 TACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAG--AGGGCTT 42699 Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTC 114156 | | |||||||||||||||||| || || | ||||| || || |||| || || Sbjct 42700 GACATTCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGA 42759 Query 114157 GTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 ||| || ||||| ||| || | | | ||| | | ||||| |||||||| || Sbjct 42760 GTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAG---TAAGGGCAGCGTGATAAAT 42816 Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 114273 ||||| || || | |||| | |||||| || ||||| | | ||| Sbjct 42817 AGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAG 42876 Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 || || |||| || ||||||||||||||||| ||||| || || || | ||| || Sbjct 42877 AGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTT 42936 Query 114334 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || ||||| | || || || || ||||||| | | || | || Sbjct 42937 GCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCA---AGTT 42993 Query 114394 GGTGACAAC--CTT-TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450 | |||||| ||| |||| ||| || ||||| | | | || | || || ||||| Sbjct 42994 GCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTTC 43050 Query 114451 A---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | |||| | ||| || | | || || || || || || | | |||||| Sbjct 43051 ATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGG 43110 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 | |||||| ||||| || || |||| || || || ||||| || | |||||| Sbjct 43111 GGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTT 43170 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 ||| || ||| ||| || ||||||||| |||||| | || | || ||||| || Sbjct 43171 TTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGT 43230 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGGCACAGTGGCGTTGGCTCGC 114685 |||| || |||||| || | ||| | | || || | | | ||| || | Sbjct 43231 CTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCG-ACCCTTG- 43288 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||||| |||||||||| ||| || || |||||||| ||||| | || | || Sbjct 43289 CCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGA 43348 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 || || || | ||||| | |||| ||||| || || ||| |||||||||||| Sbjct 43349 CCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATG 43408 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 ||||| || |||||||| ||||| ||| || || ||| ||| | || || | || Sbjct 43409 AAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 43468 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || || | || | || || | || || |||||||| || || ||||| | Sbjct 43469 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATG 43528 Query 114926 GCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 |||| | || || |||| |||||| || || | || ||| || || Sbjct 43529 GCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAAC 43588 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 115040 || || ||||| |||| |||||| | || ||||| || || ||| || ||| | Sbjct 43589 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC- 43647 Query 115041 TATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100 | |||| | || ||| | || |||||||| || ||| ||| || || | Sbjct 43648 -AGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGG 43706 Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160 | || | ||||| | ||||||| || || || ||| |||| | | | ||||| Sbjct 43707 CACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGA 43766 Query 115161 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 115220 |||| || | ||| ||| ||| ||||| |||||||| | || || |||| || Sbjct 43767 AGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAG 43826 Query 115221 TGAA 115224 |||| Sbjct 43827 TGAA 43830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350008411480