Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq174 123 2e-23
>seq174
Length=222900
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| ||||| | || || || || ||||| |||||||| | || ||| || ||||
Sbjct 54525 AAGCACGAGATGGAGTGTGGACTCCTTCTGAATATTGTAATCAGAGAGGGTTCGGCCGTC 54584
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| |||||||||||||| |||| | ||||||||||| ||||| || || || || ||
Sbjct 54585 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC 54644
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | |||||| | || || || | || | |||
Sbjct 54645 CTGAATCTTGGACTTCACATTGTCGATGGTATCAGATGACTCAACCTCGAGGGTGATGGT 54704
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||||| || || ||||| || |||||
Sbjct 54705 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 54737
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| ||||| | || ||||| || ||||||||||| || | || ||| || | ||
Sbjct 54297 AAGCACGAGATGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCATC 54356
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| || ||||||||||| |||| | ||||||||||| || ||||| || || || ||
Sbjct 54357 CTCGAGTTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 54416
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | || || | || || || | || | |||
Sbjct 54417 CTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGT 54476
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | || || ||||| || |||||
Sbjct 54477 CTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 54509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499641795885640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |