Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq51 215 5e-51 >seq51 Length=398837 Score = 215 bits (238), Expect = 5e-51 Identities = 943/1477 (64%), Gaps = 34/1477 (2%) Strand=Plus/Minus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAAGGC 93965 |||||||| || ||||| ||| || | || || || ||||| | ||| | |||| Sbjct 43806 TTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGAT-ATGAAGGA 43748 Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025 ||| ||| || || | ||| | |||||| ||||| | || || || || Sbjct 43747 GGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAGATGGC 43688 Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085 || || || || | | || |||| | ||||||| || || |||||| |||||| Sbjct 43687 TGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTAC 43628 Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145 |||||| || |||||||| |||| || ||||| || || ||||||||| | || || || Sbjct 43627 CAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTA 43568 Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205 ||| |||||||||||| | | | ||| | ||||| | || || ||||| ||||| Sbjct 43567 CGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCA 43508 Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265 ||| ||||| | ||| | || || |||||||||||||| || || || | || Sbjct 43507 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 43448 Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325 | ||||| ||| |||||| ||| | || || || || ||||| || |||||||| || Sbjct 43447 TCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAA 43388 Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC--GTTTGTGGA 94383 | || |||| |||| | || ||||| || || || || || | ||| | | || Sbjct 43387 CGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGA 43328 Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443 | | | ||||| | |||| | ||||| ||||||||| | ||| ||| Sbjct 43327 T-GAG-TTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTCGCAAGTCTATC 43270 Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503 | ||| || || ||| | || | || | ||| ||||| || | |||| | Sbjct 43269 AAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTC 43210 Query 94504 ATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAA 94562 || | | |||||| | ||| |||| |||| |||||| || |||| || ||| Sbjct 43209 ATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCG 43151 Query 94563 GAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTG 94622 ||||| || |||||||| |||||| | ||||| | || || ||| | || || || Sbjct 43150 AAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTTG 43091 Query 94623 TAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTC 94682 ||||| | |||| | ||| | ||||| | ||| | | ||||| Sbjct 43090 CAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATG-----AAG----ATGCTTG 43040 Query 94683 GTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGT 94742 | ||| | || |||| | || | | | ||| ||| |||||| | | Sbjct 43039 CTACGACTTCAAGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGAT 42980 Query 94743 AATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCC 94802 |||||| ||| |||||| || | ||||| ||| ||| || || || || Sbjct 42979 TATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCACCGACC 42920 Query 94803 CATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGA 94862 ||| || |||| ||||| ||| | || || || | | | || |||||| || Sbjct 42919 CATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTGA 42860 Query 94863 CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT 94922 ||| ||| || | |||| | | || ||||| | |||||| ||| ||| | Sbjct 42859 GTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGCTGCCCT 42800 Query 94923 GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATC 94982 | || || || | |||| ||| | || || || | ||| || || Sbjct 42799 TACTACCTCTGTGCAGCTCGCCA---AGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 42743 Query 94983 GCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTG 95040 || || | |||||||| | ||||| || | ||| ||| |||||||| | ||| Sbjct 42742 TCC--TGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGATCTT 42685 Query 95041 TACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTT 95100 | || |||||| |||| || | ||||| | | |||||| | ||| ||||| Sbjct 42684 TGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTC 42625 Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160 || || || |||||||| || || ||||||| |||||||||||||||| ||||| Sbjct 42624 GTTGCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAG 42565 Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220 |||| |||||||||| | ||| | | || || || || || || |||| || ||||| Sbjct 42564 CCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGTCAAC 42505 Query 95221 AAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC- 95278 || || | || | || || | ||||| | ||| || | ||||||| Sbjct 42504 CCCTGGCTTCTCAAGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGGTATGAAGAACCG 42446 Query 95279 ---AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCA 95335 | |||| | || || ||||||||||||| | || || | || |||| Sbjct 42445 TATCATTGCT----GATGGTGGTTCTATCCAGAACATCCCCAACATCCCTGCCGATATCA 42390 Query 95336 AGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 |||| || |||||||| ||||||||||| | ||||| Sbjct 42389 AGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCG 42353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720225476760