Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq51 215 5e-51
>seq51
Length=398837
Score = 215 bits (238), Expect = 5e-51
Identities = 943/1477 (64%), Gaps = 34/1477 (2%)
Strand=Plus/Minus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAAGGC 93965
|||||||| || ||||| ||| || | || || || ||||| | ||| | ||||
Sbjct 43806 TTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGAT-ATGAAGGA 43748
Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025
||| ||| || || | ||| | |||||| ||||| | || || || ||
Sbjct 43747 GGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAGATGGC 43688
Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085
|| || || || | | || |||| | ||||||| || || |||||| ||||||
Sbjct 43687 TGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTAC 43628
Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145
|||||| || |||||||| |||| || ||||| || || ||||||||| | || || ||
Sbjct 43627 CAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTA 43568
Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
||| |||||||||||| | | | ||| | ||||| | || || ||||| |||||
Sbjct 43567 CGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCA 43508
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
||| ||||| | ||| | || || |||||||||||||| || || || | ||
Sbjct 43507 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 43448
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| ||||| ||| |||||| ||| | || || || || ||||| || |||||||| ||
Sbjct 43447 TCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAA 43388
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC--GTTTGTGGA 94383
| || |||| |||| | || ||||| || || || || || | ||| | | ||
Sbjct 43387 CGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGA 43328
Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443
| | | ||||| | |||| | ||||| ||||||||| | ||| |||
Sbjct 43327 T-GAG-TTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTCGCAAGTCTATC 43270
Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503
| ||| || || ||| | || | || | ||| ||||| || | |||| |
Sbjct 43269 AAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTC 43210
Query 94504 ATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAA 94562
|| | | |||||| | ||| |||| |||| |||||| || |||| || |||
Sbjct 43209 ATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCG 43151
Query 94563 GAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTG 94622
||||| || |||||||| |||||| | ||||| | || || ||| | || || ||
Sbjct 43150 AAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTTG 43091
Query 94623 TAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTC 94682
||||| | |||| | ||| | ||||| | ||| | | |||||
Sbjct 43090 CAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATG-----AAG----ATGCTTG 43040
Query 94683 GTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGT 94742
| ||| | || |||| | || | | | ||| ||| |||||| | |
Sbjct 43039 CTACGACTTCAAGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGAT 42980
Query 94743 AATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCC 94802
|||||| ||| |||||| || | ||||| ||| ||| || || || ||
Sbjct 42979 TATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCACCGACC 42920
Query 94803 CATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGA 94862
||| || |||| ||||| ||| | || || || | | | || |||||| ||
Sbjct 42919 CATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTGA 42860
Query 94863 CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT 94922
||| ||| || | |||| | | || ||||| | |||||| ||| ||| |
Sbjct 42859 GTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGCTGCCCT 42800
Query 94923 GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATC 94982
| || || || | |||| ||| | || || || | ||| || ||
Sbjct 42799 TACTACCTCTGTGCAGCTCGCCA---AGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 42743
Query 94983 GCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTG 95040
|| || | |||||||| | ||||| || | ||| ||| |||||||| | |||
Sbjct 42742 TCC--TGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGATCTT 42685
Query 95041 TACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTT 95100
| || |||||| |||| || | ||||| | | |||||| | ||| |||||
Sbjct 42684 TGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTC 42625
Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160
|| || || |||||||| || || ||||||| |||||||||||||||| |||||
Sbjct 42624 GTTGCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAG 42565
Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220
|||| |||||||||| | ||| | | || || || || || || |||| || |||||
Sbjct 42564 CCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGTCAAC 42505
Query 95221 AAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC- 95278
|| || | || | || || | ||||| | ||| || | |||||||
Sbjct 42504 CCCTGGCTTCTCAAGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGGTATGAAGAACCG 42446
Query 95279 ---AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCA 95335
| |||| | || || ||||||||||||| | || || | || ||||
Sbjct 42445 TATCATTGCT----GATGGTGGTTCTATCCAGAACATCCCCAACATCCCTGCCGATATCA 42390
Query 95336 AGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|||| || |||||||| ||||||||||| | |||||
Sbjct 42389 AGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCG 42353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720225476760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |