Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq51 181 1e-40 seq73 82.4 9e-11 >seq51 Length=398837 Score = 181 bits (200), Expect = 1e-40 Identities = 1091/1728 (63%), Gaps = 59/1728 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| ||||| || |||| || |||||||||||||| || |||||||| | Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 | |||||||| || | ||||| || | |||| | ||| || | |||| Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 | ||| | | || || || ||||||||| || || ||||| ||||| | || Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCT---GCA 42344 Query 115706 CATCCTTCATCT---TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762 || ||| || || ||||||||||| |||| || ||| ||||| | |||| Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404 Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822 | | ||| || |||||||| ||||| | | || | | ||||||| | | | Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464 Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAAC 115878 |||| ||||| || | ||||||| | | ||| | |||||||| ||| Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGG----TTGACAACTTGGAAC 42520 Query 115879 TCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTG 115938 || || || ||| || | | |||||||||| ||||| ||||| |||||||| ||| Sbjct 42521 TCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTG 42580 Query 115939 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGG 115998 || || | || || | || || |||||||| || || | ||| || ||||||||| Sbjct 42581 TTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGG 42640 Query 115999 AGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCT 116056 | ||| | | | || ||| | ||||| | | || | || | || Sbjct 42641 ATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAG--AGGGCT 42698 Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116 | | |||||||||||||||||| || || | || || || || |||| || || Sbjct 42699 TGACATTCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGG 42758 Query 116117 CATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACA 116173 || || ||||| ||| || | | | ||| | | ||||| |||||||| | Sbjct 42759 AGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAG---TAAGGGCAGCGTGATAAA 42815 Query 116174 TTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGC 116233 | ||||| || || | |||| | |||||| || ||||| | | ||| Sbjct 42816 TAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGA 42875 Query 116234 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 116293 || || |||| || ||||||||||||||||| ||||| || || || | ||| | Sbjct 42876 GAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGT 42935 Query 116294 TAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353 | || ||||| | || || || || ||||||| | | || | | Sbjct 42936 TGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCA---AGT 42992 Query 116354 TGGTGACAAC--CTT-TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 116410 || |||||| ||| |||| ||| || ||||| | | | || | || || |||| Sbjct 42993 TGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTT 43049 Query 116411 CA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467 || |||| | ||| || | | || || || || || || | | |||||| Sbjct 43050 CATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAG 43109 Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527 | |||||| ||||| || || |||| || || || ||||| || | ||||| Sbjct 43110 GGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCT 43169 Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587 |||| || ||| ||| || ||||||||||||||| | || | || ||||| | Sbjct 43170 TTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTG 43229 Query 116588 TTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGCACAGTGGCGTTGGCTCG 116645 | |||| || |||||| || | ||| | | || || | | | ||| || | Sbjct 43230 TCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCG-ACCCTTG 43288 Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 ||||| |||||||||| ||| || ||||||||||| ||| || ||| || | | Sbjct 43289 -CCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCA-CCGTAGCAGTCAGCAA 43346 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | || || || | || || | |||| ||||| || || ||| || ||||||| Sbjct 43347 GACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCA 43406 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 ||||||| || |||||||| || || ||| || || ||| ||| | || || | | Sbjct 43407 TGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTAC 43466 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | || || || | || | || || | || || |||||||| || || ||||| | Sbjct 43467 CGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAA 43526 Query 116885 CCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 |||| | || | |||| |||| |||||| || || | || || || Sbjct 43527 TGGCGAAGGCACCGGGTCGCTTG---TTACCACCCTGGTCGACGTAACGAGCAGTGTTGT 43583 Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACG 116996 | || || || ||||| |||| |||||| | || ||||| || || ||| || | Sbjct 43584 TGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAG 43643 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 || | |||| | || |||| | || |||||||| || ||| ||| || || Sbjct 43644 AGCC--AGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAAT 43701 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 || || | ||||| | ||||||| ||||| || ||| |||| | | | Sbjct 43702 CATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAAC 43761 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 |||||||| || | ||| ||| ||| ||||| |||||||| | || || |||| Sbjct 43762 AAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGC 43821 Query 117177 GTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACA 117222 || ||| | | |||| ||||| | ||| || ||||||||| Sbjct 43822 ATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGACA 43867 >seq73 Length=346706 Score = 82.4 bits (90), Expect = 9e-11 Identities = 275/415 (66%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || || || || | || || | ||| || ||||| ||||| || | Sbjct 210668 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTGGTACCA 210727 Query 12762 GCGATGACAACGATGCCCGT-CTCGT-TATCGAAGCCATCCATCTCAGTCAAGAGT-TGA 12818 |||| ||| || | | || | || | | |||||| ||||| || || |||| | || Sbjct 210728 GCGAGGACGACCA--CTTGTTCACGAGTGTTGAAGCCGTCCATTTCCGT-AAGAATCTGG 210784 Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCAC---CCGCACTGC-GTTGCTT 12874 || | |||| ||||||||| || || || | || | | | || | || | || || Sbjct 210785 TTCAGGGTTGCTTCACGTTCGTCGTT-GCCGCCAAAACCCTTGCCACTCTCCTGTCGCGC 210843 Query 12875 ---ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAAC 12931 ||||| ||| ||||| ||||| ||||| | |||||| || || | ||| | | Sbjct 210844 GCGACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTC 210903 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 | || | ||||||||| | | | || ||||| ||||||||||| || || | || Sbjct 210904 GGCGAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGA 210963 Query 12992 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 || ||| | || |||||| || || |||||||| ||||| ||| || | | Sbjct 210964 ACCGCTCACACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACG 211022 Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 |||| || || || || || || | || ||||| || |||||| ||||||| Sbjct 211023 TCTTACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503511287960