Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq51 181 1e-40
seq73 82.4 9e-11
>seq51
Length=398837
Score = 181 bits (200), Expect = 1e-40
Identities = 1091/1728 (63%), Gaps = 59/1728 (3%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| ||||| || |||| || |||||||||||||| || |||||||| |
Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| |||||||| || | ||||| || | |||| | ||| || | ||||
Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
| ||| | | || || || ||||||||| || || ||||| ||||| | ||
Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCT---GCA 42344
Query 115706 CATCCTTCATCT---TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
|| ||| || || ||||||||||| |||| || ||| ||||| | ||||
Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404
Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822
| | ||| || |||||||| ||||| | | || | | ||||||| | | |
Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAAC 115878
|||| ||||| || | ||||||| | | ||| | |||||||| |||
Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGG----TTGACAACTTGGAAC 42520
Query 115879 TCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTG 115938
|| || || ||| || | | |||||||||| ||||| ||||| |||||||| |||
Sbjct 42521 TCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTG 42580
Query 115939 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGG 115998
|| || | || || | || || |||||||| || || | ||| || |||||||||
Sbjct 42581 TTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGG 42640
Query 115999 AGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCT 116056
| ||| | | | || ||| | ||||| | | || | || | ||
Sbjct 42641 ATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAG--AGGGCT 42698
Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116
| | |||||||||||||||||| || || | || || || || |||| || ||
Sbjct 42699 TGACATTCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGG 42758
Query 116117 CATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACA 116173
|| || ||||| ||| || | | | ||| | | ||||| |||||||| |
Sbjct 42759 AGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAG---TAAGGGCAGCGTGATAAA 42815
Query 116174 TTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGC 116233
| ||||| || || | |||| | |||||| || ||||| | | |||
Sbjct 42816 TAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGA 42875
Query 116234 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 116293
|| || |||| || ||||||||||||||||| ||||| || || || | ||| |
Sbjct 42876 GAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGT 42935
Query 116294 TAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353
| || ||||| | || || || || ||||||| | | || | |
Sbjct 42936 TGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCA---AGT 42992
Query 116354 TGGTGACAAC--CTT-TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 116410
|| |||||| ||| |||| ||| || ||||| | | | || | || || ||||
Sbjct 42993 TGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTT 43049
Query 116411 CA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467
|| |||| | ||| || | | || || || || || || | | ||||||
Sbjct 43050 CATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAG 43109
Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527
| |||||| ||||| || || |||| || || || ||||| || | |||||
Sbjct 43110 GGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCT 43169
Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587
|||| || ||| ||| || ||||||||||||||| | || | || ||||| |
Sbjct 43170 TTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTG 43229
Query 116588 TTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGCACAGTGGCGTTGGCTCG 116645
| |||| || |||||| || | ||| | | || || | | | ||| || |
Sbjct 43230 TCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCG-ACCCTTG 43288
Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704
||||| |||||||||| ||| || ||||||||||| ||| || ||| || | |
Sbjct 43289 -CCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCA-CCGTAGCAGTCAGCAA 43346
Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764
| || || || | || || | |||| ||||| || || ||| || |||||||
Sbjct 43347 GACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCA 43406
Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824
||||||| || |||||||| || || ||| || || ||| ||| | || || | |
Sbjct 43407 TGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTAC 43466
Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884
| || || || | || | || || | || || |||||||| || || ||||| |
Sbjct 43467 CGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAA 43526
Query 116885 CCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938
|||| | || | |||| |||| |||||| || || | || || ||
Sbjct 43527 TGGCGAAGGCACCGGGTCGCTTG---TTACCACCCTGGTCGACGTAACGAGCAGTGTTGT 43583
Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACG 116996
| || || || ||||| |||| |||||| | || ||||| || || ||| || |
Sbjct 43584 TGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAG 43643
Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056
|| | |||| | || |||| | || |||||||| || ||| ||| || ||
Sbjct 43644 AGCC--AGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAAT 43701
Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116
|| || | ||||| | ||||||| ||||| || ||| |||| | | |
Sbjct 43702 CATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAAC 43761
Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176
|||||||| || | ||| ||| ||| ||||| |||||||| | || || ||||
Sbjct 43762 AAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGC 43821
Query 117177 GTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACA 117222
|| ||| | | |||| ||||| | ||| || |||||||||
Sbjct 43822 ATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGACA 43867
>seq73
Length=346706
Score = 82.4 bits (90), Expect = 9e-11
Identities = 275/415 (66%), Gaps = 16/415 (4%)
Strand=Plus/Plus
Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761
||||| || || || || || | || || | ||| || ||||| ||||| || |
Sbjct 210668 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTGGTACCA 210727
Query 12762 GCGATGACAACGATGCCCGT-CTCGT-TATCGAAGCCATCCATCTCAGTCAAGAGT-TGA 12818
|||| ||| || | | || | || | | |||||| ||||| || || |||| | ||
Sbjct 210728 GCGAGGACGACCA--CTTGTTCACGAGTGTTGAAGCCGTCCATTTCCGT-AAGAATCTGG 210784
Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCAC---CCGCACTGC-GTTGCTT 12874
|| | |||| ||||||||| || || || | || | | | || | || | || ||
Sbjct 210785 TTCAGGGTTGCTTCACGTTCGTCGTT-GCCGCCAAAACCCTTGCCACTCTCCTGTCGCGC 210843
Query 12875 ---ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAAC 12931
||||| ||| ||||| ||||| ||||| | |||||| || || | ||| | |
Sbjct 210844 GCGACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTC 210903
Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991
| || | ||||||||| | | | || ||||| ||||||||||| || || | ||
Sbjct 210904 GGCGAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGA 210963
Query 12992 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050
|| ||| | || |||||| || || |||||||| ||||| ||| || | |
Sbjct 210964 ACCGCTCACACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACG 211022
Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
|||| || || || || || || | || ||||| || |||||| |||||||
Sbjct 211023 TCTTACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503511287960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |