Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq51 91.5 2e-13 >seq51 Length=398837 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/228 (71%), Gaps = 10/228 (4%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACATGCCG 203899 || || |||||||| |||| | |||||| ||||| | | || |||||||||||| Sbjct 42161 TCGACGGTGAACTGGATGGGGG---CGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCG 42217 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| || || || ||| || | ||||||| | | |||| || | ||| Sbjct 42218 GTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGG 42277 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGC 204018 || |||||||||||| |||||||| ||||||||| ||||| || || || || || Sbjct 42278 TCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATG-AAGGCACCACGGTCCGCAGC 42336 Query 204019 CATATTGATAA-TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 ||| | | || ||| ||| |||||||||||||| |||||| ||| Sbjct 42337 CATCTGCACAACCTGTC-GCTGAGAAATCTCCCACACAGTCTTGTACA 42383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150419129360