Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq51 91.5 2e-13
>seq51
Length=398837
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/228 (71%), Gaps = 10/228 (4%)
Strand=Plus/Plus
Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACATGCCG 203899
|| || |||||||| |||| | |||||| ||||| | | || ||||||||||||
Sbjct 42161 TCGACGGTGAACTGGATGGGGG---CGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCG 42217
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| || | ||||||| | | |||| || | |||
Sbjct 42218 GTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGG 42277
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGC 204018
|| |||||||||||| |||||||| ||||||||| ||||| || || || || ||
Sbjct 42278 TCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATG-AAGGCACCACGGTCCGCAGC 42336
Query 204019 CATATTGATAA-TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065
||| | | || ||| ||| |||||||||||||| |||||| |||
Sbjct 42337 CATCTGCACAACCTGTC-GCTGAGAAATCTCCCACACAGTCTTGTACA 42383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795150419129360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |