Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq126 109 4e-18 >seq126 Length=335456 Score = 109 bits (120), Expect = 4e-18 Identities = 299/456 (66%), Gaps = 8/456 (2%) Strand=Plus/Minus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 ||||| || ||||| | ||| || | ||||| | || |||| |||||||| || | Sbjct 285749 TCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGAGAGTT 285690 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGATTCA 517970 || || ||||||||||| || || | || | ||| | || | || ||| | | Sbjct 285689 CGCTTGGCACGTTCACAAGCGGTTCGAAGACGTCGGAGAGCA----CGGACGTTGGTGCT 285634 Query 517971 AA--TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 || || | |||| ||||| |||||| || | || | | || ||||| ||||| Sbjct 285633 AAGATCCTTCTTATGTTTTCGCTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTATC 285574 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||||||||||| ||||| | ||| | || | |||| | || | ||| | || || Sbjct 285573 GAAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTC 285514 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 |||| | | |||| ||||| ||| |||||||| | ||| || || || || || Sbjct 285513 CTCAATGGTGAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTT 285454 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 || || || || || ||||| || |||| || ||||| || || || || Sbjct 285453 GCGCTCACCCTCAACCTTCTTGTCGAGACCGTAAGCAATGGCGGCAGCGGTAGGCTCGTT 285394 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || |||| | ||| || ||||| || || || ||||| || || || || | || Sbjct 285393 GATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTG 285334 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || || || ||||| || || | |||||| Sbjct 285333 AGAGTCATTGAAGTAGGCAGGGACGGTGACAACGGC 285298 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | |||| || |||||||| || ||||| ||| | ||||||||| Sbjct 10237 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTTGATTTCTCTGCACGT 10178 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || ||||| |||| |||| || | || | || || ||||| |||| | ||| Sbjct 10177 ACCGTCATTACCGGTGATGCCAACCTTTCCCTTCACGAGGTCGGTGTGCCTCGAAGTATC 10118 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || | || ||||||| | ||| | ||| || Sbjct 10117 GCCAGAACCCTTACTTATCCCGAGACTGTTAC 10086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780798531195586