Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq126 370 1e-97 seq8 98.7 1e-15 seq82 89.7 7e-13 seq51 86.0 8e-12 >seq126 Length=335456 Score = 370 bits (410), Expect = 1e-97 Identities = 999/1528 (65%), Gaps = 25/1528 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || || || || || ||||| || ||||| | || ||| || || || || || || Sbjct 286466 TCGTCCTCCTCCTTGTACTTCTCAGCATCGTTGAGCATGCGCTCGATCTCCTCCTTGGAC 286407 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | ||| || || | | |||| || | Sbjct 286406 AGGCGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTTCCGGTGCCCTTCTCGACG 286347 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 286346 GCGGAAACGTTCATGATACCGTTGGCATCAAGATCGAAAGTGACCTCAATCTGGGGAACA 286287 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 286286 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTG 286227 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | || ||| ||||| || ||||| | || || |||| || || || Sbjct 286226 GTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 286167 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || |||| | |||| Sbjct 286166 GTAGAGAAGACCTCAGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 286107 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || || | || ||||| ||||| | || |||| || | | Sbjct 286106 ATCATACCACCAGCGGTCTCAATACCGAGAGAGAGAGGGGCGACATCCAGAAGGAGGA-- 286049 Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037 ||| | || || |||| |||| | | ||||| || ||||| | Sbjct 286048 TCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCAGAGAGAATGGCAGCCTGGACAG 285995 Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097 || ||||| || || |||||||||||||| || | || || | || || ||||| | Sbjct 285994 CGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 285935 Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | || || | | | | || | ||||| || || ||||||||||| | |||| Sbjct 285934 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 285875 Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 | || | || || || |||||||| | ||| ||| |||||||| | | Sbjct 285874 TCTCGTGGACAAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACAGGCTGGA 285815 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 || ||||| | ||| || || ||||| ||||| |||||||| |||||||| | Sbjct 285814 TAGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGATGTGT 285755 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 |||| |||| || ||| | | || || || ||||||| || || || | ||||| | Sbjct 285754 AGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGA 285695 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397 |||||||| || || ||||| || ||||| | ||| || || ||||| ||| | Sbjct 285694 GAGTTCGCTTGGCACGTTCACAAGCGGTTCGAAGACGTCGGAGAGCACGGACGTTGGTGC 285635 Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 || ||| ||||||||||| || || ||||| | |||||| || ||| | || Sbjct 285634 TAAGATCCTTCTTATGTTTTCGCTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTAT 285575 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||||||||||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 285574 CGAAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCT 285515 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | |||||| | | | || ||||| || ||||||||||| || || || ||||| |||| Sbjct 285514 CCTCAATGGTGAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGT 285455 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | || | || ||||| ||||||||||| || || || || || || || || | Sbjct 285454 TGCGCTCACCCTCAACCTTCTTGTCGAGACCGTAAGCAATGGCGGCAGCGGTAGGCTCGT 285395 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || ||| ||| || || || || | ||||| || || || || || | Sbjct 285394 TGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCT 285335 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || || || |||||||| ||||| || || || |||| |||| ||| ||||| | Sbjct 285334 GAGAGTCATTGAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCGCCGAGGT 285275 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | || || || | || ||| ||||| || | ||| | || ||||| || | | | Sbjct 285274 AAGACTCAGCAGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGA 285215 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| | ||||| || || ||||| || || | ||| || |||| | || Sbjct 285214 AGGTCTTCTTCTCACCCTTGAACTCAACCTCGATGACGGGCTT---GCCAGCCTTGTCGA 285158 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | | | | | | | ||||||||| | ||||||| || | ||||| | | Sbjct 285157 TGATTGTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGAC 285098 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| | ||||| || || || || ||||| | |||||||||||| |||||||| | Sbjct 285097 CGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGG 285038 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || ||||| || | || || || ||||| | || ||||| |||| Sbjct 285037 CGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTC 284981 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTC 8085 | || || |||||||| || || || || Sbjct 284980 GGTTACCCTGGTCGTTGGCGATGATATC 284953 >seq8 Length=684021 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| || || || ||||| || || || ||||| || Sbjct 415679 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 415620 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | || |||||||| || ||||||||||| || || | || | Sbjct 415619 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 415563 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || ||| | | |||||| || |||||||| |||||||| || || || || | Sbjct 415562 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAAGCGATAGCGGCGGCGGTGGGCT 415504 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | ||| || || ||| || || ||||| | | || || || || || |||| Sbjct 415503 CGTTGACAATTCGGAGGACGTTAAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 415444 Query 7695 GTTG 7698 | || Sbjct 415443 GCTG 415440 >seq82 Length=673301 Score = 89.7 bits (98), Expect = 7e-13 Identities = 225/338 (67%), Gaps = 12/338 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | || || || || ||| | ||||| || || | ||| Sbjct 614835 TCGAAATCTTCACCACCGAGATGGGTGTCACCGTTGGTGGACTTGACCTCGAAAACACCG 614776 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | | | || | ||| || ||||||||||| || || | | | || Sbjct 614775 TTCTGGATCTCAAGGATAGAGATATCGAAGGTACCACCACCAAGATCGTAGACGGCGACA 614716 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || | || ||| ||||||||||| || | ||| || || || || || Sbjct 614715 ATGCTGTCAGCCTC------CTTCTCGAGACCGTAAGCAAGAGCGGCGGCAGTAGGCTCG 614662 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TGT 7693 || | | ||| || ||| ||||| ||||| ||| | ||||| || || ||| ||| Sbjct 614661 TTGACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCATCCTTGGT-GCTCTGT 614605 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || || ||||| |||||||| ||||| || ||||| |||| | ||| |||| | Sbjct 614604 CGCTGAGAGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCGTTCTTGATGGGCTTAGAG 614545 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 || || | || ||| | || ||||| ||| | || || Sbjct 614544 AGGTAGGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 614507 >seq51 Length=398837 Score = 86.0 bits (94), Expect = 8e-12 Identities = 393/617 (64%), Gaps = 15/617 (2%) Strand=Plus/Plus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 ||||| || ||||| ||| | |||||||| | |||||| ||| | |||||| | Sbjct 43298 TCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 43357 Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582 | | || || | | | ||| | || | || || || |||||||| | ||| Sbjct 43358 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 43417 Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642 || ||||| | || || ||||| ||| | |||| || | ||| || ||| Sbjct 43418 GGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 43477 Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTC----TAAATAG--ACTGCA 105696 || | || || || |||| | |||||||||||||| || ||||| | | ||| Sbjct 43478 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCA 43537 Query 105697 ATAGACCCTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGT 105756 | | || || ||| || | ||| || | || || ||| |||| || Sbjct 43538 CCGGGTCGCTTGTTACCACCC---TGGTCGACGTAACGAGCAGTGTTGTTGAACACACGC 43594 Query 105757 AACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCA 105816 | ||| |||| ||||| | ||| || ||||| || || || | || | | ||| Sbjct 43595 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCA 43654 Query 105817 CGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCT 105876 || | ||| | | || |||||||| |||||| ||| || ||||| Sbjct 43655 CGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 43714 Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936 || | |||||||| ||||| || || || || ||||| | ||| ||||| || ||| Sbjct 43715 TTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAT 43774 Query 105937 GACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995 || | ||| || ||| || ||||| || ||||| | ||| || | |||||| |||| || Sbjct 43775 GATAGTTGAGG-CTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAA 43833 Query 105996 AC--CTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATA 106053 ||| || | | | ||||||||||| ||| | ||||||| || || ||| Sbjct 43834 CTTGCTTGACATGAGGTT--GTATGTTTCCAAGACACGCTCAATATTGTCACCCCAGATA 43891 Query 106054 CCAATAGCGACGCGCAT 106070 || | |||||| ||||| Sbjct 43892 CCGACAGCGACTCGCAT 43908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128981264040