Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq51 201 1e-46
seq221 154 2e-32
seq30 98.7 1e-15
seq73 91.5 2e-13
>seq51
Length=398837
Score = 201 bits (222), Expect = 1e-46
Identities = 945/1493 (63%), Gaps = 41/1493 (3%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| | ||| ||||||| ||||| |||||||| || || ||||||| |||
Sbjct 43924 CCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGAGCGTGT 43865
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
||||| |||||| || ||||| | | |||| || || | || || | ||
Sbjct 43864 CTTGGAAACATACAACCTCATGTCAAGCAAGTTCTTCACTCATGCGAGCCCCACTTTATT 43805
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| ||| || ||| | || || |||||| ||| | ||||||||
Sbjct 43804 CAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATGAAGGAGGA 43745
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| |||| || |||| ||||||| |||||| || || ||| ||||||
Sbjct 43744 CAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGG 43685
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
|||||| || || | ||| || | |||| ||| || ||||| ||
Sbjct 43684 TGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACCAA 43625
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
|||| || | ||||| |||| ||||| || || || ||| ||| || || || ||
Sbjct 43624 TGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGT 43565
Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 112024
|||| | ||| | |||| || | |||| | || ||||||||||||||
Sbjct 43564 CGACCAGGGTGG---TAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCA 43508
Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGG 112082
||| || || | ||||||||||| | || ||||| ||| | ||||||| ||||
Sbjct 43507 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 43448
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
| || || || ||| |||||| ||||| || ||||||||||||||| | || ||| ||
Sbjct 43447 T--CGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAG 43390
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202
| ||| | ||| |||| | || || || || || ||||| | || | |||
Sbjct 43389 AACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGT 43330
Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262
|| |||||||| || || ||| |||||||||| || | | | | | | || | |
Sbjct 43329 GATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAG-AGGGCAAGGGTC-GCAAGTCTA 43272
Query 112263 CCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
|| ||| | | ||| | || |||||| || | || || ||||| || | || |
Sbjct 43271 TCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCT 43212
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| || ||| |||| ||||| || |||||||| | ||| |||
Sbjct 43211 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCC 43152
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| |||||||| || || || || | || | | | |||||| || || |
Sbjct 43151 GAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTT 43092
Query 112441 GTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGACAAAGA 112491
| ||||| || || | |||| || ||| |||| ||| | | | ||
Sbjct 43091 GCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATGC--TTGCTACGA 43034
Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551
| || | | || || |||||||| || || || ||| | ||||
Sbjct 43033 C--TTCA-----AGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGA 42981
Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611
|||| || || ||||| ||| | ||||| || || ||| | ||||| |
Sbjct 42980 TTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCACCGAC 42921
Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671
| ||||||||||||||||||||||| || |||| ||| || | ||| | ||||
Sbjct 42920 CCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTG 42861
Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731
| || ||| || || | || || || || ||||| || |||||||| || |
Sbjct 42860 AGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGCTGCCC 42801
Query 112732 TTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791
|| | | | || | || ||| || ||||| || ||||| |||| ||||
Sbjct 42800 TTACTACCTCTGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTC 42741
Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG 112851
| || || | || | || || |||||||||||| | | || || || | |
Sbjct 42740 CTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGATCTTTGGG 42681
Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911
| ||||| ||||| || ||||| | ||| | || |||||||| | | |
Sbjct 42680 AGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 42621
Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971
| || ||||| || || ||| | || || | || || || || ||||| || ||||
Sbjct 42620 CTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCT 42561
Query 112972 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CA 113028
|||| | |||||||| | | || ||| || || ||||| ||||||| |
Sbjct 42560 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGTCAACCCCT 42501
Query 113029 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
|| |||| |||| || || || ||||| |||||| | | |||||||
Sbjct 42500 GGCTTCTCAAGGAT---CTTGTCGACATGGGTCTTTGGTCCGATGGTATGAAG 42451
>seq221
Length=98460
Score = 154 bits (170), Expect = 2e-32
Identities = 354/522 (68%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873
||||| ||||| ||| | |||||||| |||||| | |||| ||||| | ||| | |
Sbjct 71801 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTTCACGACTGGAACAACCGTCTGACT 71860
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
| | || | | ||||| |||| || || ||||| |||| |||||||| ||
Sbjct 71861 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATC 71920
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| || | | || | ||||| || |||| | || || |||
Sbjct 71921 GTCAACGAGAACCTCGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 71979
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||||| | || | |||| ||| | | | || || |||||| ||||
Sbjct 71980 CTTCTATGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCCCTGCTCA 72038
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 102111
| |||| || || ||||| |||| || | | ||||| | ||| | | ||
Sbjct 72039 TTGACACCTACATCAAGGACCCTGCTCAGCGCACATACCTCTTCAACGCCGTTGACACCA 72098
Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 102170
|||| || || | |||||| ||||||||||| || ||| | | |||| | | |
Sbjct 72099 TTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTC-T 72157
Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230
||||||||| |||| || | || ||||| ||||||||||||||||||| |||| ||
Sbjct 72158 TCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCC 72217
Query 102231 TTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
|| ||| | || | |||||||||||||| || |||||||| ||||| |||| |||||
Sbjct 72218 TT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAA 72276
Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||| ||||||||||| ||||| || ||| || |||||
Sbjct 72277 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 72318
>seq30
Length=356529
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178
||||| || || || |||||||| || ||||||||||| ||||| |||| | || |
Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301
Query 16179 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237
|||| | || |||||| ||| | |||||| |||| |||||| || ||||| |||||
Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241
Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||| ||||| || ||| | |||||| |||| |||| |||||| ||
Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACC 46190
>seq73
Length=346706
Score = 91.5 bits (100), Expect = 2e-13
Identities = 189/275 (69%), Gaps = 10/275 (4%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
|||||||||||| || ||||||| ||| || || || | ||| | | | || ||
Sbjct 210853 GGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGCGAATAG 210912
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 16182
||| || |||||| | || ||||||||||||||||| || || | | || ||
Sbjct 210913 ATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 210972
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| | || |||||| || ||| |||||||| ||||| ||| || | |||||||| |
Sbjct 210973 ACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCTTACCAG 211031
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGT 16299
|||| || || || | | |||||||| || |||||||| || || |||| |
Sbjct 211032 TACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACCTAGCTTTTCAAACT 211091
Query 16300 ATCTCTCAGGTTGCTT-AAGAAAATCCACAATCTC 16333
|||| || ||||| ||||| | ||||| |||
Sbjct 211092 ---TCTCGGGCTGCTTCAAGAAGCT-CACAAACTC 211122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738667786320
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