Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq51 201 1e-46 seq221 154 2e-32 seq30 98.7 1e-15 seq73 91.5 2e-13 >seq51 Length=398837 Score = 201 bits (222), Expect = 1e-46 Identities = 945/1493 (63%), Gaps = 41/1493 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| | ||| ||||||| ||||| |||||||| || || ||||||| ||| Sbjct 43924 CCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGAGCGTGT 43865 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||||| |||||| || ||||| | | |||| || || | || || | || Sbjct 43864 CTTGGAAACATACAACCTCATGTCAAGCAAGTTCTTCACTCATGCGAGCCCCACTTTATT 43805 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| ||||| ||| || ||| | || || |||||| ||| | |||||||| Sbjct 43804 CAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATGAAGGAGGA 43745 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || |||| || |||| ||||||| |||||| || || ||| |||||| Sbjct 43744 CAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGG 43685 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || || | ||| || | |||| ||| || ||||| || Sbjct 43684 TGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACCAA 43625 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 |||| || | ||||| |||| ||||| || || || ||| ||| || || || || Sbjct 43624 TGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGT 43565 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| | |||| || | |||| | || |||||||||||||| Sbjct 43564 CGACCAGGGTGG---TAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCA 43508 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGG 112082 ||| || || | ||||||||||| | || ||||| ||| | ||||||| |||| Sbjct 43507 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 43448 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 | || || || ||| |||||| ||||| || ||||||||||||||| | || ||| || Sbjct 43447 T--CGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAG 43390 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | ||| | ||| |||| | || || || || || ||||| | || | ||| Sbjct 43389 AACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGT 43330 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || |||||||| || || ||| |||||||||| || | | | | | | || | | Sbjct 43329 GATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAG-AGGGCAAGGGTC-GCAAGTCTA 43272 Query 112263 CCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 || ||| | | ||| | || |||||| || | || || ||||| || | || | Sbjct 43271 TCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCT 43212 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||| |||| ||||| || |||||||| | ||| ||| Sbjct 43211 TCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCC 43152 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || |||||||| || || || || | || | | | |||||| || || | Sbjct 43151 GAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTT 43092 Query 112441 GTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGACAAAGA 112491 | ||||| || || | |||| || ||| |||| ||| | | | || Sbjct 43091 GCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATGC--TTGCTACGA 43034 Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 | || | | || || |||||||| || || || ||| | |||| Sbjct 43033 C--TTCA-----AGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGA 42981 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 |||| || || ||||| ||| | ||||| || || ||| | ||||| | Sbjct 42980 TTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCACCGAC 42921 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671 | ||||||||||||||||||||||| || |||| ||| || | ||| | |||| Sbjct 42920 CCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTG 42861 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | || ||| || || | || || || || ||||| || |||||||| || | Sbjct 42860 AGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGCTGCCC 42801 Query 112732 TTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 || | | | || | || ||| || ||||| || ||||| |||| |||| Sbjct 42800 TTACTACCTCTGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTC 42741 Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG 112851 | || || | || | || || |||||||||||| | | || || || | | Sbjct 42740 CTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGATCTTTGGG 42681 Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 | ||||| ||||| || ||||| | ||| | || |||||||| | | | Sbjct 42680 AGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 42621 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | || ||||| || || ||| | || || | || || || || ||||| || |||| Sbjct 42620 CTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCT 42561 Query 112972 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CA 113028 |||| | |||||||| | | || ||| || || ||||| ||||||| | Sbjct 42560 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGTCAACCCCT 42501 Query 113029 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 || |||| |||| || || || ||||| |||||| | | ||||||| Sbjct 42500 GGCTTCTCAAGGAT---CTTGTCGACATGGGTCTTTGGTCCGATGGTATGAAG 42451 >seq221 Length=98460 Score = 154 bits (170), Expect = 2e-32 Identities = 354/522 (68%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||| ||||| ||| | |||||||| |||||| | |||| ||||| | ||| | | Sbjct 71801 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTTCACGACTGGAACAACCGTCTGACT 71860 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 | | || | | ||||| |||| || || ||||| |||| |||||||| || Sbjct 71861 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATC 71920 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || ||||| || | | || | ||||| || |||| | || || ||| Sbjct 71921 GTCAACGAGAACCTCGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 71979 Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||||| | || | |||| ||| | | | || || |||||| |||| Sbjct 71980 CTTCTATGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCCCTGCTCA 72038 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 102111 | |||| || || ||||| |||| || | | ||||| | ||| | | || Sbjct 72039 TTGACACCTACATCAAGGACCCTGCTCAGCGCACATACCTCTTCAACGCCGTTGACACCA 72098 Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 102170 |||| || || | |||||| ||||||||||| || ||| | | |||| | | | Sbjct 72099 TTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTC-T 72157 Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||||||| |||| || | || ||||| ||||||||||||||||||| |||| || Sbjct 72158 TCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCC 72217 Query 102231 TTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289 || ||| | || | |||||||||||||| || |||||||| ||||| |||| ||||| Sbjct 72218 TT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAA 72276 Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||| ||||||||||| ||||| || ||| || ||||| Sbjct 72277 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 72318 >seq30 Length=356529 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 ||||| || || || |||||||| || ||||||||||| ||||| |||| | || | Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301 Query 16179 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237 |||| | || |||||| ||| | |||||| |||| |||||| || ||||| ||||| Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241 Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| ||||| || ||| | |||||| |||| |||| |||||| || Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACC 46190 >seq73 Length=346706 Score = 91.5 bits (100), Expect = 2e-13 Identities = 189/275 (69%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 |||||||||||| || ||||||| ||| || || || | ||| | | | || || Sbjct 210853 GGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGCGAATAG 210912 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 16182 ||| || |||||| | || ||||||||||||||||| || || | | || || Sbjct 210913 ATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 210972 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | | || |||||| || ||| |||||||| ||||| ||| || | |||||||| | Sbjct 210973 ACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCTTACCAG 211031 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGT 16299 |||| || || || | | |||||||| || |||||||| || || |||| | Sbjct 211032 TACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACCTAGCTTTTCAAACT 211091 Query 16300 ATCTCTCAGGTTGCTT-AAGAAAATCCACAATCTC 16333 |||| || ||||| ||||| | ||||| ||| Sbjct 211092 ---TCTCGGGCTGCTTCAAGAAGCT-CACAAACTC 211122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738667786320