Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq51 266 4e-66 seq73 156 5e-33 seq221 98.7 1e-15 >seq51 Length=398837 Score = 266 bits (294), Expect = 4e-66 Identities = 1022/1589 (64%), Gaps = 51/1589 (3%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||||||||| |||||||| |||||| || || ||||| | | | | | | | Sbjct 42299 GACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCACAA----CCTGTCG 42354 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||| ||||| ||||||||||||| | ||||||||| | || |||| ||| Sbjct 42355 CTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGAT 42414 Query 109623 GTTTTGAATAGAGCCACCAGCCTTCA-CCATGA---GATCCTTCATCTCTTTCGACCAGA 109678 ||| || ||||| |||||| ||| | |||| | | |||||| | | ||||| | Sbjct 42415 GTTCTGGATAGAACCACCA----TCAGCAATGATACGGTTCTTCATACCATCGGACCAAA 42470 Query 109679 GACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAA 109738 |||| | | ||||| | | ||| |||||| || || || ||||||| Sbjct 42471 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCCAGCAA 42530 Query 109739 GTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGA 109798 | || || |||||||||| | |||||||| ||||| ||||| |||||||| || | Sbjct 42531 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAA 42590 Query 109799 TTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCG 109858 | || | || ||| |||||||| ||||| | ||| |||||||| |||| ||| | | Sbjct 42591 TCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAG 42650 Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918 |||| || ||| || | | ||||| || || || || | || ||| Sbjct 42651 TCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCA------GAGGGCTTGACAT 42704 Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978 ||||||||| || || | ||||||| |||||||| |||||||| | ||| | Sbjct 42705 TCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGG 42764 Query 109979 ACCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCT 110035 ||||| ||| ||| | || | || | || || || || ||||| ||||||| Sbjct 42765 GACCCTCCTCCTTGGCGAGCTGCACAGAGGTAG---TAAGGGCAGCGTGATAAATAGTCT 42821 Query 110036 CAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAA 110095 | || || || |||| |||| ||| | | || ||||| | | | || Sbjct 42822 CGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAA 42881 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 || |||| || ||||| || ||||||||||||||||| || || |||||| | Sbjct 42882 GGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTTGCTGT 42941 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 ||||| || || ||||| |||| |||||| | | || | | | | || Sbjct 42942 TGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCA-AGTTGCGGACA 43000 Query 110216 CAGTCTT-CGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGAC 110273 | ||| |||| ||| || || || | | | ||| | | | ||| | || |||| Sbjct 43001 ACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTGAT 43059 Query 110274 ATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333 | || |||| | || ||||| ||||| || | ||| || | || ||| Sbjct 43060 GAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTA 43119 Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393 || | ||| || || |||| |||||| || ||| ||| | |||||| || || Sbjct 43120 CTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCT 43179 Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453 ||| |||||| |||||| ||||||||| | ||| | || || || ||||| | || Sbjct 43180 CTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTC 43239 Query 110454 GAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCC 110511 ||||||||| | ||| | | || || || ||||| | | || || | Sbjct 43240 GAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCG--ACCCTTGCCCTCTCTC 43297 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 |||||||| ||||| ||||||| || | ||||| |||| |||||| | Sbjct 43298 TCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 43357 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | || ||| || | || | ||| | || || ||| || | ||||||||| || ||| Sbjct 43358 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 43417 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||| | || ||| |||||||| || |||| || | ||| ||||| Sbjct 43418 GGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 43477 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA----- 110746 || || || | || || | || || | ||||||||| || || || | |||| Sbjct 43478 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCA 43537 Query 110747 -TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || || ||| || || |||||| || || || || ||| ||||| || | Sbjct 43538 CCGGGTCGCTTGTTACCAC---CCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGC 43594 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| |||| || || | ||| |||||| ||||| || || | ||||| Sbjct 43595 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCA 43654 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTC 110924 || || |||| || || ||||||||||| ||| ||| ||| |||| | || Sbjct 43655 CGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 43714 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| ||| | || ||||||||||| || |||| | ||| || ||||| || Sbjct 43715 T-TGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGA 43773 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 || | ||||| | || || || || ||||| | || || |||||||| ||| || Sbjct 43774 TGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGA--AG 43831 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTC 111071 | |||| ||||| ||||||||| || Sbjct 43832 AACTTGCTTGACATGAGGTTGTATGTTTC 43860 >seq73 Length=346706 Score = 156 bits (172), Expect = 5e-33 Identities = 320/466 (69%), Gaps = 26/466 (6%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | ||||| | || || ||||| | ||||| ||| | Sbjct 210668 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTGGTACCA 210727 Query 11563 GCAATGACTACAATGCCAGT-CTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| || | | || | | | ||| ||| ||||||||||| || |||| ||||| Sbjct 210728 GCGAGGACGACCA--CTTGTTCACGAGTGTTGAAGCCGTCCATTTCCGTAAGAATCTGGT 210785 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT----- 11675 | | || |||||| || |||||| | | ||| | |||| || || || Sbjct 210786 TCAGGGTTGCTTCACGTTCGTCGTTGCCGCCAAAACC-CTTGCC--ACTCTCCTGTCGCG 210842 Query 11676 ----ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731 ||||| || |||||||| |||||||| | |||||| || ||| ||| ||| Sbjct 210843 CGCGACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCT 210902 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 |||| || || || |||||| | ||||||||| || |||||||||||||| | | Sbjct 210903 CGGCGAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGG 210962 Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || |||||||| |||||| || ||||||||| || ||||| || || | Sbjct 210963 AACCGC-TCACACTGAA-GAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAA 211020 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--- 11906 |||||||| |||||||| | ||||| | || || || || |||||||||||||| Sbjct 211021 CGTCTTACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACCTAG 211080 Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || |||| | ||| |||| ||| | |||| ||||| |||| Sbjct 211081 CTTTTCAAACT---TCTCGGGCTGCTTCAAGAAGCTCACAAACTCC 211123 >seq221 Length=98460 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || ||||| |||||||||||||| || |||| || || Sbjct 72319 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACC 72260 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| ||||||| | ||| ||| |||||||| Sbjct 72259 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGAT 72200 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 ||||| ||| || ||||| | ||||||| |||||| Sbjct 72199 ACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAA 72161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972458781800