Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq51 266 4e-66
seq73 156 5e-33
seq221 98.7 1e-15
>seq51
Length=398837
Score = 266 bits (294), Expect = 4e-66
Identities = 1022/1589 (64%), Gaps = 51/1589 (3%)
Strand=Plus/Plus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566
||||||||||| |||||||| |||||| || || ||||| | | | | | | |
Sbjct 42299 GACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCACAA----CCTGTCG 42354
Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622
|| ||| ||||| ||||||||||||| | ||||||||| | || |||| |||
Sbjct 42355 CTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGAT 42414
Query 109623 GTTTTGAATAGAGCCACCAGCCTTCA-CCATGA---GATCCTTCATCTCTTTCGACCAGA 109678
||| || ||||| |||||| ||| | |||| | | |||||| | | ||||| |
Sbjct 42415 GTTCTGGATAGAACCACCA----TCAGCAATGATACGGTTCTTCATACCATCGGACCAAA 42470
Query 109679 GACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAA 109738
|||| | | ||||| | | ||| |||||| || || || |||||||
Sbjct 42471 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCCAGCAA 42530
Query 109739 GTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGA 109798
| || || |||||||||| | |||||||| ||||| ||||| |||||||| || |
Sbjct 42531 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAA 42590
Query 109799 TTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCG 109858
| || | || ||| |||||||| ||||| | ||| |||||||| |||| ||| | |
Sbjct 42591 TCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAG 42650
Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918
|||| || ||| || | | ||||| || || || || | || |||
Sbjct 42651 TCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCA------GAGGGCTTGACAT 42704
Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978
||||||||| || || | ||||||| |||||||| |||||||| | ||| |
Sbjct 42705 TCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGG 42764
Query 109979 ACCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCT 110035
||||| ||| ||| | || | || | || || || || ||||| |||||||
Sbjct 42765 GACCCTCCTCCTTGGCGAGCTGCACAGAGGTAG---TAAGGGCAGCGTGATAAATAGTCT 42821
Query 110036 CAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAA 110095
| || || || |||| |||| ||| | | || ||||| | | | ||
Sbjct 42822 CGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAA 42881
Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155
|| |||| || ||||| || ||||||||||||||||| || || |||||| |
Sbjct 42882 GGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTTGCTGT 42941
Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215
||||| || || ||||| |||| |||||| | | || | | | | ||
Sbjct 42942 TGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCA-AGTTGCGGACA 43000
Query 110216 CAGTCTT-CGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGAC 110273
| ||| |||| ||| || || || | | | ||| | | | ||| | || ||||
Sbjct 43001 ACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTGAT 43059
Query 110274 ATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333
| || |||| | || ||||| ||||| || | ||| || | || |||
Sbjct 43060 GAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTA 43119
Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393
|| | ||| || || |||| |||||| || ||| ||| | |||||| || ||
Sbjct 43120 CTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCT 43179
Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453
||| |||||| |||||| ||||||||| | ||| | || || || ||||| | ||
Sbjct 43180 CTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTC 43239
Query 110454 GAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCC 110511
||||||||| | ||| | | || || || ||||| | | || || |
Sbjct 43240 GAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCG--ACCCTTGCCCTCTCTC 43297
Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571
|||||||| ||||| ||||||| || | ||||| |||| |||||| |
Sbjct 43298 TCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 43357
Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631
| || ||| || | || | ||| | || || ||| || | ||||||||| || |||
Sbjct 43358 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 43417
Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691
|| ||||| | || ||| |||||||| || |||| || | ||| |||||
Sbjct 43418 GGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 43477
Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA----- 110746
|| || || | || || | || || | ||||||||| || || || | ||||
Sbjct 43478 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCA 43537
Query 110747 -TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805
|| || ||| || || |||||| || || || || ||| ||||| || |
Sbjct 43538 CCGGGTCGCTTGTTACCAC---CCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGC 43594
Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865
||||| |||| || || | ||| |||||| ||||| || || | |||||
Sbjct 43595 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCA 43654
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTC 110924
|| || |||| || || ||||||||||| ||| ||| ||| |||| | ||
Sbjct 43655 CGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 43714
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| |||| ||| | || ||||||||||| || |||| | ||| || ||||| ||
Sbjct 43715 T-TGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGA 43773
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
|| | ||||| | || || || || ||||| | || || |||||||| ||| ||
Sbjct 43774 TGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGA--AG 43831
Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTC 111071
| |||| ||||| ||||||||| ||
Sbjct 43832 AACTTGCTTGACATGAGGTTGTATGTTTC 43860
>seq73
Length=346706
Score = 156 bits (172), Expect = 5e-33
Identities = 320/466 (69%), Gaps = 26/466 (6%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||| || || || || | ||||| | || || ||||| | ||||| ||| |
Sbjct 210668 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTGGTACCA 210727
Query 11563 GCAATGACTACAATGCCAGT-CTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| | ||| || | | || | | | ||| ||| ||||||||||| || |||| |||||
Sbjct 210728 GCGAGGACGACCA--CTTGTTCACGAGTGTTGAAGCCGTCCATTTCCGTAAGAATCTGGT 210785
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT----- 11675
| | || |||||| || |||||| | | ||| | |||| || || ||
Sbjct 210786 TCAGGGTTGCTTCACGTTCGTCGTTGCCGCCAAAACC-CTTGCC--ACTCTCCTGTCGCG 210842
Query 11676 ----ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731
||||| || |||||||| |||||||| | |||||| || ||| ||| |||
Sbjct 210843 CGCGACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCT 210902
Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791
|||| || || || |||||| | ||||||||| || |||||||||||||| | |
Sbjct 210903 CGGCGAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGG 210962
Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849
| || |||||||| |||||| || ||||||||| || ||||| || || |
Sbjct 210963 AACCGC-TCACACTGAA-GAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAA 211020
Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--- 11906
|||||||| |||||||| | ||||| | || || || || ||||||||||||||
Sbjct 211021 CGTCTTACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACCTAG 211080
Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
|| |||| | ||| |||| ||| | |||| ||||| ||||
Sbjct 211081 CTTTTCAAACT---TCTCGGGCTGCTTCAAGAAGCTCACAAACTCC 211123
>seq221
Length=98460
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || ||||| || ||||| |||||||||||||| || |||| || ||
Sbjct 72319 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACC 72260
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||| || | ||||| ||||| ||||||| | ||| ||| ||||||||
Sbjct 72259 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGAT 72200
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653
||||| ||| || ||||| | ||||||| ||||||
Sbjct 72199 ACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAA 72161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972458781800
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