Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq51 192 7e-44
seq221 95.1 1e-14
seq30 95.1 1e-14
>seq51
Length=398837
Score = 192 bits (212), Expect = 7e-44
Identities = 1138/1808 (63%), Gaps = 37/1808 (2%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| ||||||||||| || | ||||| | | ||||| | |
Sbjct 42200 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 42259
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| || || | | ||| |||||| ||||||
Sbjct 42260 ATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATGAAG 42319
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | | || ||| || || |||||||| ||
Sbjct 42320 GCACCACGGTCCGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 42376
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| ||| ||||||||| | ||||| | | ||| || || || ||||| || |
Sbjct 42377 TTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCATCA 42436
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886
| || | | ||||||| | | |||||||||||| || | ||||| ||||
Sbjct 42437 GCAATGATACGGTTCTTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 42496
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946
|| |||||||| ||||| || || ||| || | | |||||||| |
Sbjct 42497 AGCCAGGGGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 42556
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
|||||||| || ||||| || || || || | || || | ||| || || |||||
Sbjct 42557 GTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATA 42616
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066
|| || | | |||||||| || | ||| | ||||| || |||| |||
Sbjct 42617 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCC 42676
Query 106067 CAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124
|| || | | | || || || || |||| |||||||||| || || | || | |
Sbjct 42677 CACTCCCAAAGATCAGAG-GGCTTGACATTCC-ACATATCAAACTGGAGAATGCCCTCAG 42734
Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTC 106183
| | ||||| |||| || || |||| ||| | | | || | | |||||
Sbjct 42735 AGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGG 42794
Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243
| |||| |||||||| || || || ||||| | |||| ||| || ||
Sbjct 42795 TAGTA-AGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCG 42853
Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
|| ||||| | |||| || || |||| || |||||||| ||||| | |
Sbjct 42854 GGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGA 42913
Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTT 106360
||||| |||| ||| ||||| || || | ||| || ||| ||| || || ||
Sbjct 42914 CCAATGGGTCGGTGACGCATGTTG--CTGTTGCG-AGCCTCTTGAACAGGGTAGTGGTTG 42970
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
||| || | ||| | || | ||| | | |||| ||| || || || |
Sbjct 42971 ACGTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTG 43030
Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
| || | || || ||||||| ||| | || || | | || || |
Sbjct 43031 AAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGG 43087
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
|||||||| || |||||| | |||||| | ||| || || |||| ||||||
Sbjct 43088 TTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAG 43147
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||||||||| ||||| |||||| |||||||||||||
Sbjct 43148 CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 43207
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGC- 106656
||| |||| | || ||||| ||||| | || |||||| || | ||| | | ||
Sbjct 43208 ATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCC 43267
Query 106657 -TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
|| || | | ||| ||| | ||||| |||||||||| ||| || || ||||||
Sbjct 43268 TTGATAGACTTGCGA---CCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAC 43324
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774
|| ||||| ||| | ||||| || || || || || | ||||| |||||
Sbjct 43325 TCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCG 43384
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
|| || ||| || ||||||||||| || || || ||||| || | || || ||
Sbjct 43385 CCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCA 43444
Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894
| | || |||| || | ||| ||||| ||| | ||||||||||| | || ||
Sbjct 43445 CGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCG 43504
Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 106951
||||||||||||||||| || | |||| | || ||| ||| | || |
Sbjct 43505 GCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCG 43564
Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011
|| || || || ||| ||| || || || ||||| |||| ||||| | || ||||
Sbjct 43565 ACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCA 43624
Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
|| || || || ||| | |||| | | ||| | || ||||||||
Sbjct 43625 TTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCA 43684
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
|||||| ||| || || ||||| | | ||||| | |||||||| | || |
Sbjct 43685 CCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTG 43744
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191
|||||||| | | | ||||||||| || | || || ||| ||||| || |||
Sbjct 43745 TCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTG 43804
Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249
|| | || || | || ||| ||| | | |||| ||||| || |||||| ||||
Sbjct 43805 AATAAAGTGGGGCTCGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCA 43862
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
||||| ||||| | || || ||| |||| || || ||||| | ||| | || |
Sbjct 43863 AGACACGCTCAATATTGTCACCCCAGATACCGACAGCGACTCGCATGATCATATGCTGCG 43922
Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGAC 107369
| || | |||| || | | || |||||||||| | ||||| ||| ||
Sbjct 43923 GGCGCTCGGCAATTTTGCCGTCAATCTGTAGAAGATAGCTTCTAGACAGGGTCCTGAAAC 43982
Query 107370 CAAAGTAA 107377
|||| |||
Sbjct 43983 CAAAATAA 43990
>seq221
Length=98460
Score = 95.1 bits (104), Expect = 1e-14
Identities = 330/507 (65%), Gaps = 26/507 (5%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || |||| ||||| |||||
Sbjct 72606 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTCCATG 72547
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || | || || | | | | || | | | || ||||
Sbjct 72546 AAGTCGAAGGGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGAC------GAGG 72493
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || |||| ||||||| ||| | |||||||| |||| |||
Sbjct 72492 AGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 72433
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| ||||| || || | |||| | | |||||| ||| || || | | ||
Sbjct 72432 GCACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATAATT 72373
Query 117220 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| || || | | | ||| ||| || | || | | ||| || ||||
Sbjct 72372 TCCTGAATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGAAGGAGG--CA-GGCA 72316
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| ||||||||||| || || || || || || || |||| || || |||
Sbjct 72315 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGC 72256
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACC 117395
||||| || |||||||| | ||| | || | ||| || | || ||||||||||||
Sbjct 72255 ATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCACTGAAGAAGATACC 72197
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAA 117452
||| ||| ||||| || | ||| |||| || ||||| ||| || |||| |
Sbjct 72196 CTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGA---AGAGTTCTTGTCCTGGAT 72140
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTT 117479
|||| || ||||| | |||||||||
Sbjct 72139 CCATCGGATGGCCCAATCCGCCTTCTT 72113
>seq30
Length=356529
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485
||||| || || || | ||||| || ||||||||||| ||||| |||| | || |
Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301
Query 9486 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544
|||| | || |||||| ||| | |||||| |||| |||||| || ||||| |||||
Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241
Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
||| ||||| || ||| | |||||| ||||| |||| |||||| ||
Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACC 46190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977252740440
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