Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq51 192 7e-44 seq221 95.1 1e-14 seq30 95.1 1e-14 >seq51 Length=398837 Score = 192 bits (212), Expect = 7e-44 Identities = 1138/1808 (63%), Gaps = 37/1808 (2%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| ||||||||||| || | ||||| | | ||||| | | Sbjct 42200 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 42259 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| || || | | ||| |||||| |||||| Sbjct 42260 ATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATGAAG 42319 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766 |||||| | || ||||| | | || ||| || || |||||||| || Sbjct 42320 GCACCACGGTCCGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 42376 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826 ||| ||| ||||||||| | ||||| | | ||| || || || ||||| || | Sbjct 42377 TTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCATCA 42436 Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 | || | | ||||||| | | |||||||||||| || | ||||| |||| Sbjct 42437 GCAATGATACGGTTCTTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 42496 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 || |||||||| ||||| || || ||| || | | |||||||| | Sbjct 42497 AGCCAGGGGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 42556 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 |||||||| || ||||| || || || || | || || | ||| || || ||||| Sbjct 42557 GTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATA 42616 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || || | | |||||||| || | ||| | ||||| || |||| ||| Sbjct 42617 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCC 42676 Query 106067 CAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 || || | | | || || || || |||| |||||||||| || || | || | | Sbjct 42677 CACTCCCAAAGATCAGAG-GGCTTGACATTCC-ACATATCAAACTGGAGAATGCCCTCAG 42734 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTC 106183 | | ||||| |||| || || |||| ||| | | | || | | ||||| Sbjct 42735 AGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGG 42794 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 | |||| |||||||| || || || ||||| | |||| ||| || || Sbjct 42795 TAGTA-AGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCG 42853 Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 || ||||| | |||| || || |||| || |||||||| ||||| | | Sbjct 42854 GGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGA 42913 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTT 106360 ||||| |||| ||| ||||| || || | ||| || ||| ||| || || || Sbjct 42914 CCAATGGGTCGGTGACGCATGTTG--CTGTTGCG-AGCCTCTTGAACAGGGTAGTGGTTG 42970 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 ||| || | ||| | || | ||| | | |||| ||| || || || | Sbjct 42971 ACGTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTG 43030 Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | || || ||||||| ||| | || || | | || || | Sbjct 43031 AAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGG 43087 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 |||||||| || |||||| | |||||| | ||| || || |||| |||||| Sbjct 43088 TTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAG 43147 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||||||||| ||||| |||||| ||||||||||||| Sbjct 43148 CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 43207 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGC- 106656 ||| |||| | || ||||| ||||| | || |||||| || | ||| | | || Sbjct 43208 ATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCC 43267 Query 106657 -TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || || | | ||| ||| | ||||| |||||||||| ||| || || |||||| Sbjct 43268 TTGATAGACTTGCGA---CCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAC 43324 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774 || ||||| ||| | ||||| || || || || || | ||||| ||||| Sbjct 43325 TCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCG 43384 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || || ||| || ||||||||||| || || || ||||| || | || || || Sbjct 43385 CCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCA 43444 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 | | || |||| || | ||| ||||| ||| | ||||||||||| | || || Sbjct 43445 CGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCG 43504 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 106951 ||||||||||||||||| || | |||| | || ||| ||| | || | Sbjct 43505 GCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCG 43564 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 || || || || ||| ||| || || || ||||| |||| ||||| | || |||| Sbjct 43565 ACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCA 43624 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || || ||| | |||| | | ||| | || |||||||| Sbjct 43625 TTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCA 43684 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 |||||| ||| || || ||||| | | ||||| | |||||||| | || | Sbjct 43685 CCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTG 43744 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191 |||||||| | | | ||||||||| || | || || ||| ||||| || ||| Sbjct 43745 TCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTG 43804 Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249 || | || || | || ||| ||| | | |||| ||||| || |||||| |||| Sbjct 43805 AATAAAGTGGGGCTCGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCA 43862 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 ||||| ||||| | || || ||| |||| || || ||||| | ||| | || | Sbjct 43863 AGACACGCTCAATATTGTCACCCCAGATACCGACAGCGACTCGCATGATCATATGCTGCG 43922 Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGAC 107369 | || | |||| || | | || |||||||||| | ||||| ||| || Sbjct 43923 GGCGCTCGGCAATTTTGCCGTCAATCTGTAGAAGATAGCTTCTAGACAGGGTCCTGAAAC 43982 Query 107370 CAAAGTAA 107377 |||| ||| Sbjct 43983 CAAAATAA 43990 >seq221 Length=98460 Score = 95.1 bits (104), Expect = 1e-14 Identities = 330/507 (65%), Gaps = 26/507 (5%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || |||| ||||| ||||| Sbjct 72606 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTCCATG 72547 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | || || | | | | || | | | || |||| Sbjct 72546 AAGTCGAAGGGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGAC------GAGG 72493 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 |||||||| | || |||| ||||||| ||| | |||||||| |||| ||| Sbjct 72492 AGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 72433 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 ||| ||||| || || | |||| | | |||||| ||| || || | | || Sbjct 72432 GCACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATAATT 72373 Query 117220 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 | || || | | | ||| ||| || | || | | ||| || |||| Sbjct 72372 TCCTGAATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGAAGGAGG--CA-GGCA 72316 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||| ||||||||||| || || || || || || || |||| || || ||| Sbjct 72315 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGC 72256 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACC 117395 ||||| || |||||||| | ||| | || | ||| || | || |||||||||||| Sbjct 72255 ATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCACTGAAGAAGATACC 72197 Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAA 117452 ||| ||| ||||| || | ||| |||| || ||||| ||| || |||| | Sbjct 72196 CTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGA---AGAGTTCTTGTCCTGGAT 72140 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTT 117479 |||| || ||||| | ||||||||| Sbjct 72139 CCATCGGATGGCCCAATCCGCCTTCTT 72113 >seq30 Length=356529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 ||||| || || || | ||||| || ||||||||||| ||||| |||| | || | Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301 Query 9486 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544 |||| | || |||||| ||| | |||||| |||| |||||| || ||||| ||||| Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241 Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||| ||||| || ||| | |||||| ||||| |||| |||||| || Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACC 46190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977252740440