Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq89 104 3e-17
>seq89
Length=150458
Score = 104 bits (114), Expect = 3e-17
Identities = 261/392 (67%), Gaps = 5/392 (1%)
Strand=Plus/Plus
Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770
|||| || || |||| || | || || || || || || ||||| |||| ||||
Sbjct 126313 GAAAGGTCTGCCTGATCCCTGTTTCTGCCCACGGTACCAACCCTGCCTCGGCTGCTATGG 126372
Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAG 154827
| || ||||| || || ||||||||| || | | || ||||||| | ||||| | |
Sbjct 126373 CTGGCATGAAGGTCGTCACTGTCAAGTGCGACGGCAAGACTGGTAACCTGGACATTGAGG 126432
Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887
|||| || || ||| | | | ||| || | ||| ||| | || ||||
Sbjct 126433 ATCTCAAGGCTAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTCACCTACC 126492
Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947
| ||||| |||||| ||||| | | |||| ||| | ||| | | ||||| ||
Sbjct 126493 CCTCTACTTTTGGTGTCTTTGAGCCCGAGATTAAGCAGGTCTGTGATCTTGTTCACGAGC 126552
Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007
| ||||||| || || | || || || || | || || ||| | || || |
Sbjct 126553 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTTTGCTCTC 126612
Query 155008 CATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066
| |||| ||| || || ||||| || ||||| ||| | || || || |||||||||||
Sbjct 126613 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 126671
Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098
||||| ||||| || ||||| || ||||||||
Sbjct 126672 CATGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 126703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579209317483040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |