Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq89 120 4e-22 >seq89 Length=150458 Score = 120 bits (132), Expect = 4e-22 Identities = 266/394 (68%), Gaps = 5/394 (1%) Strand=Plus/Plus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || || | |||| Sbjct 126313 GAAAGGTCTGCCTGATCCCTGTTTCTGCCCACGGTACCAACCCTGCCTCGGCTGCTATGG 126372 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGCAACATAGACATCAAAG 159502 | || ||||| || || ||||||||| || | | || ||| ||| | ||||| | | Sbjct 126373 CTGGCATGAAGGTCGTCACTGTCAAGTGCGACGGCAAGACTGGTAACCTGGACATTGAGG 126432 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562 |||| || || ||| | | | ||| || | ||| ||| | || || | Sbjct 126433 ATCTCAAGGCTAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTCACCTACC 126492 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622 | ||||| |||||| ||||| | | || | ||| | ||| | ||||||| ||| Sbjct 126493 CCTCTACTTTTGGTGTCTTTGAGCCCGAGATTAAGCAGGTCTGTGATCTTGTTCACGAGC 126552 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 | ||||||| || || | || ||||| || | || || ||| | ||||| | Sbjct 126553 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTTTGCTCTC 126612 Query 159683 CATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 | |||| ||| || || ||||| || ||||| ||| | || ||||| ||||||||||| Sbjct 126613 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 126671 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 ||||| ||||| || ||||| || |||||||||| Sbjct 126672 CATGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 126705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047664342160