Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq174 105 5e-18
seq126 84.2 2e-11
>seq174
Length=222900
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||| | ||| || ||| ||| || ||||||||||||||||| || ||||
Sbjct 54520 AGGCGAAGCACGAGATGGAGTGTGGACTCCTTCTGAATATTGTAATCAGAGAGGGTTCGG 54579
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| ||||| || |||| |||||| || || | || | |||||||
Sbjct 54580 CCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCC 54639
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 54640 TTGTCCTGAATCTTGGACTTCACATTGTCGATGGTATCAGATGACTCAACCTCGAGGGTG 54699
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || ||||| || || || || ||||||||
Sbjct 54700 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 54737
>seq126
Length=335456
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 9093 TTGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCAC 9152
||| ||||| | ||| |||| || | |||||| | |||| || ||||| || |
Sbjct 42465 TTGGGCAATGCGGTCGCCCTCCTTAATCTGAAAGTCGGAGTCGTTGTGGTTGAAGAGAAG 42524
Query 9153 CACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTG 9212
|| ||| | || | |||||| ||||||| ||||||||||| ||||||||||||
Sbjct 42525 GACCTTCACTTGGCCACGGTAATCGGCATCGATGACACCAGCACCTGTGTCGATGAAGTG 42584
Query 9213 CTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGACC 9248
|||| || || || || ||||| ||||| |||||
Sbjct 42585 CTTGGAGGCGAGACCTGATCGGGGAGCGATACGACC 42620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380935366872363
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |