Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq51 311 2e-79 seq221 210 4e-49 >seq51 Length=398837 Score = 311 bits (344), Expect = 2e-79 Identities = 1144/1761 (65%), Gaps = 92/1761 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | |||||||||| || || || ||||||||||||||||| Sbjct 42164 ACGGTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTG 42223 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| | |||||| |||| ||| |||| | | || Sbjct 42224 AGACCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATTGTAG- 42275 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | || || || | ||| || |||||| |||||| ||||| | | Sbjct 42276 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACC 42324 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | | | || ||| || | ||||||||| |||||| | | Sbjct 42325 ACGGTCCGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 42384 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | |||| | |||||||||||| | ||| || | | ||| | Sbjct 42385 AGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGAT 42444 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | ||| | ||| ||| || ||| || | || ||||| || Sbjct 42445 ACGGTTCTT---CATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCA 42501 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | ||||| || || | || || | | ||||| | ||| || ||||| Sbjct 42502 GGGGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTA 42561 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||||||||| || |||||||| | || || || |||||||| ||||| Sbjct 42562 GGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGC 42621 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTCTGCCC 213081 || || |||||||| | | ||||| || | | | | | || || | ||| Sbjct 42622 AACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGAGATTCCC 42677 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141 | ||||| |||| | ||| || |||||||| |||||||| | |||| Sbjct 42678 ACTCCCAAAGATCAGAGGG---------CTTGACATTCCACATATCAAACTGGAGAATGC 42728 Query 213142 CTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 | |||| | || ||||| | | | ||||||||| || | ||||||||| ||| Sbjct 42729 C----CTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGC 42784 Query 213198 TCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256 | ||| || | |||||||||| || || || || || || | | |||| |||| Sbjct 42785 T-GCACAGAGGTAGTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTC 42843 Query 213257 CTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTG 213316 ||||| || ||| |||||||| | |||| ||||||| || || || Sbjct 42844 ACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTG 42903 Query 213317 GACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGT 213375 ||| |||| || ||||||| ||| | || ||| ||| |||| ||| | | |||| Sbjct 42904 GACACCGAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGC-CTCTTGAACAGGGT 42962 Query 213376 AAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCA 213435 | |||| |||||| |||||||| | ||||||| | |||| ||||| | | | Sbjct 42963 AGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTA 43022 Query 213436 GGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACA-------AACTCAGGCAGGGCG 213488 | | || |||| |||||| | || | || | || |||||| | Sbjct 43023 GCTTCT------TGAAGTCGTAGCAAGCATCTT-CATAGTTGATGAAAGAAGGCAGAGAC 43075 Query 213489 ATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTG 213548 | | ||| |||||||||||||| ||||| | || | | |||||| || ||||| ||| Sbjct 43076 AAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTG 43135 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-A 213607 ||||||||| || ||||||||| || ||||||| ||| ||| ||||| | |||| Sbjct 43136 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGG-TTGCTCTTGCGGTTGCAGTG 43194 Query 213608 ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCA 213667 |||||||||||||||| ||||| ||||||||| ||||| | | || || | ||| Sbjct 43195 ATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCA 43254 Query 213668 GAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGT 213726 || | ||||||| | || | | | | | | | |||||||| ||||| Sbjct 43255 AAGTTTTTGAGCCTTGA----TAGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGT 43310 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACAC 213785 | || | | || || | || || | | | | || || || || ||| ||| Sbjct 43311 ACAGAGCCTCAAACTCATCACCGTAGCAGTCAG-CAAGACCAGGGCACTCGTTGGGGCAC 43369 Query 213786 ATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 || || |||| || ||| || |||| ||| | || |||||| || || |||| ||| || Sbjct 43370 ATAAGAGTCCATTCGCCGTTCTTCTC-GACACGCTTCATGAAGAGATCAGGGATCCAAAG 43428 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 ||| ||||||||| | | | ||| ||| || ||| || || ||||| || Sbjct 43429 AGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAG 43488 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT 213964 || || |||| ||| |||||||| ||||| | ||| ||||| ||||| || || | ||| Sbjct 43489 GAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTT 43548 Query 213965 G---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 | || |||||||| || | || ||||||| | ||||| | ||| || | Sbjct 43549 GTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 43608 Query 214022 CCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTC 214079 |||||||| || ||||| || || || || ||||| | ||| | | | || | Sbjct 43609 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGC 43668 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 || | || || || ||||| || |||||| |||||||| || | | | ||| || Sbjct 43669 ATTCA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCG 43726 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAGCTGGGG 214198 ||| || | |||||||| || | | ||| ||| |||||| || || || || Sbjct 43727 TAGATACCATCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGATGATAGTTGAGG 43785 Query 214199 CCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258 | | | || | |||||| | |||||||| ||||| | | |||||| | || | Sbjct 43786 CTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACAT 43845 Query 214259 GAGCCTGTAGGTCTCCAGGAC 214279 ||| |||| || |||| ||| Sbjct 43846 GAGGTTGTATGTTTCCAAGAC 43866 >seq221 Length=98460 Score = 210 bits (232), Expect = 4e-49 Identities = 493/735 (67%), Gaps = 27/735 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 72610 CTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTC 72551 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || |||||| | || ||| | | || | Sbjct 72550 CATGAAGTCGAAGGGGTTGGTAGCCTTGTACACCT-TCTCGTTGCCGAGAGCGACGAGGA 72492 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||||||||| | ||||||| || ||||||||| | || | Sbjct 72491 GACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGAG 72432 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | ||||| || || ||||||| ||| || ||||| || | ||| Sbjct 72431 CACAAGGG-AGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATAATT 72373 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGC----ATAG---AGCAT 48129 | || || |||| |||| || ||| || | | | | || || | Sbjct 72372 TCCTGAATCA-----TCTG----TTTGCTG-GCACGTCCCTTGAGGTGAGAGTGAAGGAG 72323 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||||||||| |||| | || || || || ||||||| ||||||| |||| || Sbjct 72322 GCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAG 72263 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | || || | ||| |||||| Sbjct 72262 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAA 72203 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || || || || || | || | || |||| ||||||||| Sbjct 72202 GATACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTG 72143 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 |||||| | ||||| || |||||||| |||||| || || || || | ||| Sbjct 72142 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTT 72083 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTA 48426 |||||| | ||| || | | | |||| | ||||| | ||||||| | ||| Sbjct 72082 GAAGAGGTATGTGCGCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAG---GGAGTA 72026 Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486 | || ||||| | ||||| || ||||||||| || |||||| | ||||| Sbjct 72025 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGG 71966 Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546 | ||| || || | ||| | ||| | || ||||| ||||| || ||||| || || Sbjct 71965 GATCTGGACCTCGCCGCTGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGC 71906 Query 48547 AGCAAAGAAGGCAAG 48561 ||| ||||| ||||| Sbjct 71905 AGCGAAGAAAGCAAG 71891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527199159040