Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq51 178 2e-39 seq221 170 4e-37 >seq51 Length=398837 Score = 178 bits (196), Expect = 2e-39 Identities = 718/1117 (64%), Gaps = 43/1117 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||| || || ||||| ||||| |||||| || ||| | |||||||| Sbjct 42797 GTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCGGG 42855 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || |||| ||| Sbjct 42856 AGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACC 42915 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | ||| || ||| | || || || ||||||| Sbjct 42916 AATGGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGAACAGGGTAGTGGTTGACG 42973 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | ||| | | ||||| | || ||| ||||||| | Sbjct 42974 TCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAG 43033 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| | | || | || | | | || || || | | | | Sbjct 43034 TCGTAG--CAAG----CATCTTCAT--AGTTGATGAAAGAAGGC----AGAGACAAGGAG 43081 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || ||||| ||||| || | | |||| || ||||| || || ||| Sbjct 43082 GCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGG 43141 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832 ||| || |||||| || |||| || || || |||||| ||| ||| | ||||| Sbjct 43142 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCCTT 43200 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| ||||| || ||||| ||| ||| | ||||| || ||| |||| Sbjct 43201 GTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTT 43260 Query 221893 TCTGGCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATA 221946 | || | | | | | |||| | | | |||| |||||| ||| | Sbjct 43261 TTGAGCCTTGATAGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTAC-------A 43313 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | |||||| |||||||| || | || || || ||| | ||| ||||| Sbjct 43314 GAGCCT--CAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACAT 43371 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 ||| |||| | ||| | | ||| | || ||||||||| || |||||||| || || Sbjct 43372 AAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGC 43431 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || || || | | || ||||||| |||| ||| || | ||||| | || Sbjct 43432 GAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 43491 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | ||| |||||||| ||||| || || | ||| | || |||||||||||||| Sbjct 43492 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTT 43551 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 |||||||| || | | | ||| | |||||| | || || | || || | | Sbjct 43552 ACCACCCTGGTCGA-CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATAC 43610 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGG 222302 ||||||| ||| ||||| || ||||| | || ||| | | ||| || Sbjct 43611 CGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---GGG 43667 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 || || ||| |||||||| || || || |||||||| || |||||||||| || Sbjct 43668 CATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGT 43727 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| || || || ||||||||| | | | || || || || || | |||| | Sbjct 43728 AGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCT 43787 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | || || |||||| || | ||||| || || || || ||| | || ||||| | Sbjct 43788 GTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGA 43847 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCC 222519 | | ||| || || | ||| | | || ||||| || Sbjct 43848 GGTTGTATGTTTCCAAGACACGCTCAATATTGTCACC 43884 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || |||||||| || || | || || | | ||||| | ||| || ||| | || Sbjct 42505 GTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGG 42564 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||| || ||||| | || || || |||||||| || || || Sbjct 42565 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAAC 42624 Query 221236 CAGCAGACTGTTGCG 221250 |||||||||||||| Sbjct 42625 GAGCAGACTGTTGCG 42639 >seq221 Length=98460 Score = 170 bits (188), Expect = 4e-37 Identities = 378/564 (67%), Gaps = 5/564 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| || || ||||| ||||| Sbjct 71765 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCTGAGGAGATCGATCTC 71824 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || ||| | ||||||||| | || || Sbjct 71825 TCCAAGGATCTTCACGACTGGAACAACCGTCTGACTTCAGACGAGCAATACTTCATCTCC 71884 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| ||||| || || |||||||| || ||| | Sbjct 71885 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTCGTTGAGCGT 71944 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||| || |||||||| || Sbjct 71945 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGATG 72004 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| || || || ||| | || ||||| | ||| || Sbjct 72005 GAGAACATCCACTCCGAAACATACTCCCTGCTCATTGACACCTACATCAAGGACCCTGCT 72064 Query 25774 GAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 || | | || || || ||| | || ||| || ||||| | ||||||| Sbjct 72065 CAGCGCACATAC-CTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCGGA 72123 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| |||||| | | ||| | || | |||| |||| || ||||| || Sbjct 72124 TTGGGCCATCCGATGGATCCAGGACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAGCTTT 72183 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||||||| ||||| ||||| ||||| ||| | ||||| ||||||||||||||||| | Sbjct 72184 TGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCAAGAA 72243 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || ||| ||||||||||||||||||| | || |||||||| Sbjct 72244 GCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCGTGATGAGGGTCT 72303 Query 26013 CCACAGAGATTTTGCCTGCCTGCT 26036 |||| || ||||||||||| || Sbjct 72304 TCACACTGACTTTGCCTGCCTCCT 72327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839215320640