Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq51 178 2e-39
seq221 170 4e-37
>seq51
Length=398837
Score = 178 bits (196), Expect = 2e-39
Identities = 718/1117 (64%), Gaps = 43/1117 (4%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||| || || ||||| ||||| |||||| || ||| | ||||||||
Sbjct 42797 GTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCGGG 42855
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| |||||||| || || | ||| | || || || || || || |||| |||
Sbjct 42856 AGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACC 42915
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
||||| | ||| | | ||||| | ||| || ||| | || || || |||||||
Sbjct 42916 AATGGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGAACAGGGTAGTGGTTGACG 42973
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| | ||| | | ||||| | || ||| ||||||| |
Sbjct 42974 TCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAG 43033
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
| | | ||| | | || | || | | | || || || | | | |
Sbjct 43034 TCGTAG--CAAG----CATCTTCAT--AGTTGATGAAAGAAGGC----AGAGACAAGGAG 43081
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|| ||||| || ||||| ||||| || | | |||| || ||||| || || |||
Sbjct 43082 GCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGG 43141
Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832
||| || |||||| || |||| || || || |||||| ||| ||| | |||||
Sbjct 43142 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCCTT 43200
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||||||||| ||||| || ||||| ||| ||| | ||||| || ||| ||||
Sbjct 43201 GTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTT 43260
Query 221893 TCTGGCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATA 221946
| || | | | | | |||| | | | |||| |||||| ||| |
Sbjct 43261 TTGAGCCTTGATAGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTAC-------A 43313
Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006
|||| | |||||| |||||||| || | || || || ||| | ||| |||||
Sbjct 43314 GAGCCT--CAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACAT 43371
Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066
||| |||| | ||| | | ||| | || ||||||||| || |||||||| || ||
Sbjct 43372 AAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGC 43431
Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126
| || || || | | || ||||||| |||| ||| || | ||||| | ||
Sbjct 43432 GAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 43491
Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186
||| || | ||| |||||||| ||||| || || | ||| | || ||||||||||||||
Sbjct 43492 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTT 43551
Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
|||||||| || | | | ||| | |||||| | || || | || || | |
Sbjct 43552 ACCACCCTGGTCGA-CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATAC 43610
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGG 222302
||||||| ||| ||||| || ||||| | || ||| | | ||| ||
Sbjct 43611 CGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---GGG 43667
Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362
|| || ||| |||||||| || || || |||||||| || |||||||||| ||
Sbjct 43668 CATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGT 43727
Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422
||| || || || ||||||||| | | | || || || || || | |||| |
Sbjct 43728 AGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCT 43787
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
| || || |||||| || | ||||| || || || || ||| | || ||||| |
Sbjct 43788 GTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGA 43847
Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCC 222519
| | ||| || || | ||| | | || ||||| ||
Sbjct 43848 GGTTGTATGTTTCCAAGACACGCTCAATATTGTCACC 43884
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || |||||||| || || | || || | | ||||| | ||| || ||| | ||
Sbjct 42505 GTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGG 42564
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || |||||||||||| || ||||| | || || || |||||||| || || ||
Sbjct 42565 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAAC 42624
Query 221236 CAGCAGACTGTTGCG 221250
||||||||||||||
Sbjct 42625 GAGCAGACTGTTGCG 42639
>seq221
Length=98460
Score = 170 bits (188), Expect = 4e-37
Identities = 378/564 (67%), Gaps = 5/564 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | || |||||| || || ||||| |||||
Sbjct 71765 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCTGAGGAGATCGATCTC 71824
Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || ||| | ||||||||| | || ||
Sbjct 71825 TCCAAGGATCTTCACGACTGGAACAACCGTCTGACTTCAGACGAGCAATACTTCATCTCC 71884
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || ||||| ||||| || || |||||||| || ||| |
Sbjct 71885 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTCGTTGAGCGT 71944
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||| || |||||||| ||
Sbjct 71945 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGATG 72004
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773
|| || | ||||| || || || ||| | || ||||| | ||| ||
Sbjct 72005 GAGAACATCCACTCCGAAACATACTCCCTGCTCATTGACACCTACATCAAGGACCCTGCT 72064
Query 25774 GAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
|| | | || || || ||| | || ||| || ||||| | |||||||
Sbjct 72065 CAGCGCACATAC-CTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCGGA 72123
Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892
|||||||| |||||| | | ||| | || | |||| |||| || ||||| ||
Sbjct 72124 TTGGGCCATCCGATGGATCCAGGACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAGCTTT 72183
Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952
||||||||| ||||| ||||| ||||| ||| | ||||| ||||||||||||||||| |
Sbjct 72184 TGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCAAGAA 72243
Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012
| || |||||| || ||| ||||||||||||||||||| | || ||||||||
Sbjct 72244 GCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCGTGATGAGGGTCT 72303
Query 26013 CCACAGAGATTTTGCCTGCCTGCT 26036
|||| || ||||||||||| ||
Sbjct 72304 TCACACTGACTTTGCCTGCCTCCT 72327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839215320640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |