Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq89 107 2e-18 >seq89 Length=150458 Score = 107 bits (118), Expect = 2e-18 Identities = 263/394 (67%), Gaps = 5/394 (1%) Strand=Plus/Minus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| ||||| ||||||||||| ||||| || | | Sbjct 126705 CAATAGGACCGACACCAGGGCCACCACCACCATGGGGAATACAGAAGGTCTTGTGGAGGT 126646 Query 138247 TTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTT 138305 | ||||| || ||||| || || ||| |||| || ||||| | ||| || || Sbjct 126645 TAAGATGGCAGACATCAGCGCCGATA-TCACCAGGAGAGCAAAGACCAATCTGGGCGTTC 126587 Query 138306 AGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGT 138365 | || ||||| || | || || ||||||| | || ||||| | | ||| | ||| Sbjct 126586 ATGTTGGCACCGTCCATGTAGACGAGACCACCGTGCTCGTGAACAAGATCACAGACCTGC 126527 Query 138366 CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGT 138425 | || | | ||||| |||||| ||| || || || || | ||| ||| | ||| Sbjct 126526 TTAATCTCGGGCTCAAAGACACCAAAAGTAGAGGGGTAGGTGACCATGATAGCAGCGAGC 126467 Query 138426 TCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT- 138483 ||| | | | ||| || || ||||| | ||||| | ||| ||| || | Sbjct 126466 TCATCAGCGTGCTTGACACACTTAGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTG 126407 Query 138484 -CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTT 138542 | || ||||||||| || || ||||| || ||||| | || ||||| || || Sbjct 126406 CCGTCGCACTTGACAGTGACGACCTTCATGCCAGCCATAGCAGCCGAGGCAGGGTTGGTA 126347 Query 138543 CCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || || | || ||||| || || |||| Sbjct 126346 CCGTGGGCAGAAACAGGGATCAGGCAGACCTTTC 126313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994918772120