Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq51 183 4e-41 seq221 95.1 1e-14 >seq51 Length=398837 Score = 183 bits (202), Expect = 4e-41 Identities = 574/882 (65%), Gaps = 19/882 (2%) Strand=Plus/Minus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||| |||||| ||| ||||| | |||||||||| || | | || |||| | Sbjct 43990 TTATTTTGGTTTCAGGACCCTGTCTAGAAGCTATCTTCTACAGATTGACGGCAAAATTGC 43931 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || ||| ||| | ||| ||||||| ||||| |||| ||| || || | ||||| Sbjct 43930 CGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGA 43871 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322 ||||||||| |||||| || ||||| |||| | | ||| ||| || | || Sbjct 43870 GCGTGTCTTGGAAACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCC 43813 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || | ||||| || ||||| ||| || || | || ||||||||| | | | Sbjct 43812 ACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATG 43753 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||||||| || | |||||||| | ||||| | | ||||| || || ||| Sbjct 43752 AAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAG 43693 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 |||||| |||||||| || | ||| | | |||| | ||| || Sbjct 43692 ATGGCTGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCC 43633 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || |||||| || | ||||| |||| ||||| || || || ||| ||| || Sbjct 43632 GGTACCAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCT 43573 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAA 75616 || || || | || ||| || |||| | || || |||| | ||| | || Sbjct 43572 CGTTACGTCGACCA---GGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAG 43516 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 |||||||| ||||| || | ||||||||||| | ||| ||||| ||| | || ||| Sbjct 43515 CCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAG 43456 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 | || | | || || || | || ||||| || || || ||||||||||| || Sbjct 43455 GTCCGCGCTCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTC 43396 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 ||| || || ||||| ||||| | || || || || || ||||| | ||| Sbjct 43395 GAGAAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGC 43336 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGC 75855 ||||| |||||||| || || ||| |||||| || |||| || || | | || Sbjct 43335 TACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTC---GC 43279 Query 75856 GACTGTACCA--GCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 | | || || || | ||||| | || |||||| | | ||||| ||||| ||| Sbjct 43278 AAGTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGA 43219 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 | || | ||||| ||||||||| || ||| ||||| ||||||||||| | || Sbjct 43218 AACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGT 43159 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 || ||| ||||| || || ||||| || ||| | |||||| Sbjct 43158 ACCATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTAC 43117 >seq221 Length=98460 Score = 95.1 bits (104), Expect = 1e-14 Identities = 330/507 (65%), Gaps = 26/507 (5%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079 ||||||||| | ||||| || |||| | |||| || ||| ||||| || || Sbjct 72113 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTCT---TCCTTTGCTCAG 72169 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138 || ||| | || ||||| ||| ||||||||||||||| || | || ||| | || Sbjct 72170 CGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTT-TGCTTCCAT 72228 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | ||| | |||||||| || |||||||| || || |||| || || || || || || Sbjct 72229 CTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTC 72288 Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258 || ||||||||||| ||| || |||||| || ||| | | || | || | Sbjct 72289 TCGTGATGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTTCACTCTCACCTCAAGGG 72345 Query 65259 AC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315 || ||| | | | || || | || | | || || ||| |||||| | | Sbjct 72346 ACGTGCCAGCAAACAGATGATTCAGGAAATTATCACCGATGCCGTTACCATTGAGCAGGA 72405 Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375 |||| | || || ||||| ||| ||| |||| |||||||| | ||| | Sbjct 72406 GTTCCTTACTGAGGCTCTCCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCA 72465 Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACCCA-----T 65429 |||||| |||| || | |||||||||||| || | | | || | | | Sbjct 72466 GTACATCGAGTTCGTCGCTGATCGTCTCCTC------GTCGCTCTCGGCAACGAGAAGGT 72519 Query 65430 TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAA 65489 | || || | || || || ||||| ||||| ||||| |||| || |||||||| Sbjct 72520 GTACAAGGCTACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAA 72579 Query 65490 CTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||| |||||||| |||| ||||| Sbjct 72580 CTTCTTCGAGAAGCGTGTTGCTGACTA 72606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566013125280