Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq51 183 4e-41
seq221 95.1 1e-14
>seq51
Length=398837
Score = 183 bits (202), Expect = 4e-41
Identities = 574/882 (65%), Gaps = 19/882 (2%)
Strand=Plus/Minus
Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204
||| |||||| ||| ||||| | |||||||||| || | | || |||| |
Sbjct 43990 TTATTTTGGTTTCAGGACCCTGTCTAGAAGCTATCTTCTACAGATTGACGGCAAAATTGC 43931
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
|| ||| ||| | ||| ||||||| ||||| |||| ||| || || | |||||
Sbjct 43930 CGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGA 43871
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||||||||| |||||| || ||||| |||| | | ||| ||| || | ||
Sbjct 43870 GCGTGTCTTGGAAACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCC 43813
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|| | ||||| || ||||| ||| || || | || ||||||||| | | |
Sbjct 43812 ACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATG 43753
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||||||| || | |||||||| | ||||| | | ||||| || || |||
Sbjct 43752 AAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAG 43693
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
|||||| |||||||| || | ||| | | |||| | ||| ||
Sbjct 43692 ATGGCTGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCC 43633
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| || |||||| || | ||||| |||| ||||| || || || ||| ||| ||
Sbjct 43632 GGTACCAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCT 43573
Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAA 75616
|| || || | || ||| || |||| | || || |||| | ||| | ||
Sbjct 43572 CGTTACGTCGACCA---GGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAG 43516
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|||||||| ||||| || | ||||||||||| | ||| ||||| ||| | || |||
Sbjct 43515 CCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAG 43456
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
| || | | || || || | || ||||| || || || ||||||||||| ||
Sbjct 43455 GTCCGCGCTCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTC 43396
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
||| || || ||||| ||||| | || || || || || ||||| | |||
Sbjct 43395 GAGAAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGC 43336
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGC 75855
||||| |||||||| || || ||| |||||| || |||| || || | | ||
Sbjct 43335 TACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTC---GC 43279
Query 75856 GACTGTACCA--GCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
| | || || || | ||||| | || |||||| | | ||||| ||||| |||
Sbjct 43278 AAGTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGA 43219
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
| || | ||||| ||||||||| || ||| ||||| ||||||||||| | ||
Sbjct 43218 AACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGT 43159
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015
|| ||| ||||| || || ||||| || ||| | ||||||
Sbjct 43158 ACCATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTAC 43117
>seq221
Length=98460
Score = 95.1 bits (104), Expect = 1e-14
Identities = 330/507 (65%), Gaps = 26/507 (5%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079
||||||||| | ||||| || |||| | |||| || ||| ||||| || ||
Sbjct 72113 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTCT---TCCTTTGCTCAG 72169
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138
|| ||| | || ||||| ||| ||||||||||||||| || | || ||| | ||
Sbjct 72170 CGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTT-TGCTTCCAT 72228
Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198
| ||| | |||||||| || |||||||| || || |||| || || || || || ||
Sbjct 72229 CTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTC 72288
Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258
|| ||||||||||| ||| || |||||| || ||| | | || | || |
Sbjct 72289 TCGTGATGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTTCACTCTCACCTCAAGGG 72345
Query 65259 AC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315
|| ||| | | | || || | || | | || || ||| |||||| | |
Sbjct 72346 ACGTGCCAGCAAACAGATGATTCAGGAAATTATCACCGATGCCGTTACCATTGAGCAGGA 72405
Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375
|||| | || || ||||| ||| ||| |||| |||||||| | ||| |
Sbjct 72406 GTTCCTTACTGAGGCTCTCCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCA 72465
Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACCCA-----T 65429
|||||| |||| || | |||||||||||| || | | | || | | |
Sbjct 72466 GTACATCGAGTTCGTCGCTGATCGTCTCCTC------GTCGCTCTCGGCAACGAGAAGGT 72519
Query 65430 TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAA 65489
| || || | || || || ||||| ||||| ||||| |||| || ||||||||
Sbjct 72520 GTACAAGGCTACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAA 72579
Query 65490 CTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|||||| |||||||| |||| |||||
Sbjct 72580 CTTCTTCGAGAAGCGTGTTGCTGACTA 72606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566013125280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |