Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq221 159 1e-33
seq126 138 3e-27
seq110 132 1e-25
>seq221
Length=98460
Score = 159 bits (176), Expect = 1e-33
Identities = 300/436 (69%), Gaps = 4/436 (1%)
Strand=Plus/Plus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || || ||| ||||| | ||||| |||||| || ||||| || ||||
Sbjct 71967 CCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCACTCCGAAACAT 72026
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423
| || || ||||| || |||||||| || | | ||| ||||| || | ||||||
Sbjct 72027 ACTCCCTGCTCATTGACACCTACATCAAGGACCCTGCTCAGC-GCACATACCTCTTCAAC 72085
Query 133424 GCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||| || | ||||||| || |||||| | || ||||| || ||||||||||
Sbjct 72086 GCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAG 72145
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|||||| | |||||| ||||| || |||||||||| || ||||| || ||
Sbjct 72146 GACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTC 72205
Query 133544 ttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602
||||||||||| || ||| || || || ||||| || ||||| || | | ||||| ||
Sbjct 72206 TTCAGTGGTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCT 72264
Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTT 133662
| | ||||| ||||| || || || | || |||| |||||||| || |||||| |
Sbjct 72265 GAGCTTTTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCT 72324
Query 133663 ACTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGA 133722
||||||||| | | || ||| || || | | |||| | |||||||| | ||
Sbjct 72325 CCTTCACTCTCACCTCAAGGGACGTGCCAGCAAACAGATGATTCAGGAAATTATCACCGA 72384
Query 133723 AGCGGTTGAAATTGAG 133738
|| ||| ||||||
Sbjct 72385 TGCCGTTACCATTGAG 72400
>seq126
Length=335456
Score = 138 bits (152), Expect = 3e-27
Identities = 211/298 (71%), Gaps = 2/298 (1%)
Strand=Plus/Plus
Query 302568 AATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTAC 302627
|| |||||| | | ||||| || || ||||| || ||||||||| || ||| || ||
Sbjct 8684 AAGGTCTTCAAGAGCCTTGACCAATCGTCGCTGGATGTAACCAGTTTCAGCTGTCTTGAC 8743
Query 302628 AGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
|| |||||||| ||||| | |||||| |||| || |||||||| | ||| | || |
Sbjct 8744 CGCAGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCG-CTGGGGG 8802
Query 302688 TA-GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACT 302746
|| | || | | | ||| |||| ||||||||||| || ||||| |||| || ||
Sbjct 8803 TAAGACCACGCAGGTAAGAGTTCTCGACGAAACCACGGGCTTCGGGAGAATAATCATCCT 8862
Query 302747 TGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGT 302806
|||| || || ||||| || | | || | || | || ||||||||||| ||||||
Sbjct 8863 TGGTGAAATGAGGCAGAGTACGATACTTGAAACCAAAGGGAATACGCTTTCCTTCAACGA 8922
Query 302807 TCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
||||||| || | || | ||||||| ||||| || | | | |||||||| ||
Sbjct 8923 TCTGCTGACCAACAAGCGCAGTCATCTGTGAAATGTTGATAGAAGAACCCTTGGAACC 8980
>seq110
Length=189356
Score = 132 bits (146), Expect = 1e-25
Identities = 386/587 (66%), Gaps = 12/587 (2%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| | | ||||||| || | ||| | || ||
Sbjct 153608 ATGAGTCCACAAATTTCGCAAACGTGGACTCGGAAAGCATCCGACACCTCAAACAGACGC 153667
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| |||| || |||||||| | |||||| |||||||| ||||| || |||||
Sbjct 153668 TCCTTCAGGAAGGCAGCAGCACCGTGAGCAATCATGCAATCACGTTCCATCTCTCCGAAT 153727
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| ||||||||||| ||||| | ||||||| ||||||| || || | | | | |||
Sbjct 153728 CGTAGACCACCATCTCGAGCACGACCCTCGACAGGCTGTCGGGTCATAATCTGAACGGGA 153787
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| || ||| || ||| || | ||||| || |||||||||||| |||
Sbjct 153788 CCACGGGCACGGGCGTGGATCTTGTCGTCCACCATGTGACGAAGACGCTGGTAGTATGTA 153847
Query 251647 GGACCGATGAAGATGCTCGA--AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704
|| |||| ||||| || || | | | | ||| || || | || ||||| || |
Sbjct 153848 GGTCCGAAGAAGA--CTTGAGCACGGAGCTTACGTCCGGTGTGACCATTGTACATGACCT 153905
Query 251705 CGTTTCCATTAGATTCATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCT 251761
| || ||||| ||||| ||| || || ||||| | || | | |
Sbjct 153906 CAAAACCTCGAGATTGGTAACCGTGTTTTCTCAAAAGATCTGACACGGAAT--CGACGGT 153963
Query 251762 TGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA 251821
| || | | || || |||| || | | |||| | | | || || | |
Sbjct 153964 TACATCAG-TGAATGGCGTTGCGTCACCCTCCATACCCTCCAGTGTTGAGACCTTACTCA 154022
Query 251822 AAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGA 251881
|||| ||| ||| ||||| || ||||||||| |||||||| || || |||||||
Sbjct 154023 AAAGACACTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGA 154082
Query 251882 TGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTT 251940
| ||||| || |||| || || |||| |||||||||| | || |||| |
Sbjct 154083 TAATGTCAGGAGTCAGACCCTCTCTGCTGAAAGGCATATCCTCCT-GTCGATAAGTAACA 154141
Query 251941 CCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| || || |||||||| |||||||||||| ||||| ||||||||
Sbjct 154142 CCGATTGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 154188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471808529464097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |