Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq221 159 1e-33 seq126 138 3e-27 seq110 132 1e-25 >seq221 Length=98460 Score = 159 bits (176), Expect = 1e-33 Identities = 300/436 (69%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || || ||| ||||| | ||||| |||||| || ||||| || |||| Sbjct 71967 CCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCACTCCGAAACAT 72026 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | || || ||||| || |||||||| || | | ||| ||||| || | |||||| Sbjct 72027 ACTCCCTGCTCATTGACACCTACATCAAGGACCCTGCTCAGC-GCACATACCTCTTCAAC 72085 Query 133424 GCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||| || | ||||||| || |||||| | || ||||| || |||||||||| Sbjct 72086 GCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAG 72145 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 |||||| | |||||| ||||| || |||||||||| || ||||| || || Sbjct 72146 GACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTC 72205 Query 133544 ttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602 ||||||||||| || ||| || || || ||||| || ||||| || | | ||||| || Sbjct 72206 TTCAGTGGTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCT 72264 Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTT 133662 | | ||||| ||||| || || || | || |||| |||||||| || |||||| | Sbjct 72265 GAGCTTTTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCT 72324 Query 133663 ACTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGA 133722 ||||||||| | | || ||| || || | | |||| | |||||||| | || Sbjct 72325 CCTTCACTCTCACCTCAAGGGACGTGCCAGCAAACAGATGATTCAGGAAATTATCACCGA 72384 Query 133723 AGCGGTTGAAATTGAG 133738 || ||| |||||| Sbjct 72385 TGCCGTTACCATTGAG 72400 >seq126 Length=335456 Score = 138 bits (152), Expect = 3e-27 Identities = 211/298 (71%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 302568 AATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTAC 302627 || |||||| | | ||||| || || ||||| || ||||||||| || ||| || || Sbjct 8684 AAGGTCTTCAAGAGCCTTGACCAATCGTCGCTGGATGTAACCAGTTTCAGCTGTCTTGAC 8743 Query 302628 AGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 || |||||||| ||||| | |||||| |||| || |||||||| | ||| | || | Sbjct 8744 CGCAGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCG-CTGGGGG 8802 Query 302688 TA-GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACT 302746 || | || | | | ||| |||| ||||||||||| || ||||| |||| || || Sbjct 8803 TAAGACCACGCAGGTAAGAGTTCTCGACGAAACCACGGGCTTCGGGAGAATAATCATCCT 8862 Query 302747 TGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGT 302806 |||| || || ||||| || | | || | || | || ||||||||||| |||||| Sbjct 8863 TGGTGAAATGAGGCAGAGTACGATACTTGAAACCAAAGGGAATACGCTTTCCTTCAACGA 8922 Query 302807 TCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||||||| || | || | ||||||| ||||| || | | | |||||||| || Sbjct 8923 TCTGCTGACCAACAAGCGCAGTCATCTGTGAAATGTTGATAGAAGAACCCTTGGAACC 8980 >seq110 Length=189356 Score = 132 bits (146), Expect = 1e-25 Identities = 386/587 (66%), Gaps = 12/587 (2%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 153608 ATGAGTCCACAAATTTCGCAAACGTGGACTCGGAAAGCATCCGACACCTCAAACAGACGC 153667 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| || |||||||| | |||||| |||||||| ||||| || ||||| Sbjct 153668 TCCTTCAGGAAGGCAGCAGCACCGTGAGCAATCATGCAATCACGTTCCATCTCTCCGAAT 153727 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 || ||||||||||| ||||| | ||||||| ||||||| || || | | | | ||| Sbjct 153728 CGTAGACCACCATCTCGAGCACGACCCTCGACAGGCTGTCGGGTCATAATCTGAACGGGA 153787 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || || ||| || ||| || | ||||| || |||||||||||| ||| Sbjct 153788 CCACGGGCACGGGCGTGGATCTTGTCGTCCACCATGTGACGAAGACGCTGGTAGTATGTA 153847 Query 251647 GGACCGATGAAGATGCTCGA--AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704 || |||| ||||| || || | | | | ||| || || | || ||||| || | Sbjct 153848 GGTCCGAAGAAGA--CTTGAGCACGGAGCTTACGTCCGGTGTGACCATTGTACATGACCT 153905 Query 251705 CGTTTCCATTAGATTCATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCT 251761 | || ||||| ||||| ||| || || ||||| | || | | | Sbjct 153906 CAAAACCTCGAGATTGGTAACCGTGTTTTCTCAAAAGATCTGACACGGAAT--CGACGGT 153963 Query 251762 TGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA 251821 | || | | || || |||| || | | |||| | | | || || | | Sbjct 153964 TACATCAG-TGAATGGCGTTGCGTCACCCTCCATACCCTCCAGTGTTGAGACCTTACTCA 154022 Query 251822 AAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGA 251881 |||| ||| ||| ||||| || ||||||||| |||||||| || || ||||||| Sbjct 154023 AAAGACACTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGA 154082 Query 251882 TGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTT 251940 | ||||| || |||| || || |||| |||||||||| | || |||| | Sbjct 154083 TAATGTCAGGAGTCAGACCCTCTCTGCTGAAAGGCATATCCTCCT-GTCGATAAGTAACA 154141 Query 251941 CCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || || || |||||||| |||||||||||| ||||| |||||||| Sbjct 154142 CCGATTGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 154188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808529464097