Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq51 161 9e-35
seq174 96.9 3e-15
>seq51
Length=398837
Score = 161 bits (178), Expect = 9e-35
Identities = 473/718 (66%), Gaps = 23/718 (3%)
Strand=Plus/Plus
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
||||||||||||||| || | || || ||||||||| ||||| |||| | | ||
Sbjct 43297 CTCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCA 43356
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| || || ||||| || | |||| |||||||| || ||| ||| ||||||| |||||
Sbjct 43357 CTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 43416
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481
|| ||||| | ||||| | || || || || || ||| ||| |||
Sbjct 43417 AGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTT--C 43474
Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539
|||| | | |||||| || || ||||| ||||||||||| || || || ||||| |
Sbjct 43475 TTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAG 43534
Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596
|| || || ||| ||||| || ||||||| || ||| || ||||| || |||
Sbjct 43535 GCACCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGC 43594
Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652
| ||| || | | |||| | | || || ||||| || | | | | | | ||
Sbjct 43595 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGT---- 43650
Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712
|| |||| || |||| | ||| || || || | | ||||| || | | ||
Sbjct 43651 GGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACA 43710
Query 139713 A-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771
| || | | || ||||| ||||| |||||||| |||| ||| || || ||||
Sbjct 43711 AGTCTTG-AGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGC 43769
Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831
|||| || ||||| || || || ||||| || | ||| || ||||| || ||||
Sbjct 43770 ATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGA 43829
Query 139832 A-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890
| | ||| || ||||| | | ||| ||||| | | | | | |||||| || |
Sbjct 43830 AGAACTTGCTT-GACATGAGGTTGTATGTTTCCAAGACACGCTCAATATTGTCACCCCAG 43888
Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950
|||||||||| ||||||||| | |||||| || || ||||| | ||| || ||
Sbjct 43889 ATACCGACAGCGACTCGCATGATCATATGCTGCGGGCGCTCGGCAATTTTGCCGTCAATC 43948
Query 139951 tttttCAGATAACCGTTCT--CTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| | ||||| | |||| |||||| || | ||||| || | ||||| || ||
Sbjct 43949 TGTAGAAGATAGC--TTCTAGACAGGGTCCTGAAACCAAAATAATTGTAGTTAAAGTC 44004
>seq174
Length=222900
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || ||||| || || | ||
Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||| || ||||| || || || |||||| ||| | | || || || |||
Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
||||| |||||||| ||||| ||
Sbjct 54329 ATTCAGAAGGAATCCACACTCCA 54307
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || || ||||| || || | |
Sbjct 54737 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCATCT 54678
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 54677 GATACCATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 54618
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||| || ||||| || ||||| ||||| ||| | | || ||||| ||
Sbjct 54617 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCTCTGATTACAAT 54558
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || ||||| || | ||| | || | || |||||
Sbjct 54557 ATTCAGAAGGAGTCCACACTCCATCTCGTGCTTCGCCTTCGTGGAGG 54511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449894894990680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |