Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq221 150 3e-30
seq65 122 1e-21
seq224 98.7 2e-14
>seq221
Length=98460
Score = 150 bits (166), Expect = 3e-30
Identities = 236/333 (71%), Gaps = 15/333 (5%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||| | |||||| ||||| || || |||||||||||||||||
Sbjct 72301 ACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGCATGAGGCCGCGCTT 72242
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 794457
||||||||| ||||||| | | || || | | ||| ||||| ||||| || || |||
Sbjct 72241 CTTGAGCCAGAAGATGGAA--GCAAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCA 72184
Query 794458 AAGCCGACGAGCCGCTCGGCAAA---AGTGTCCAGGCCCTCTTTGTTGATCCACTTCATC 794514
|| | || || |||| ||||| || || | | ||| |||||| ||
Sbjct 72183 AAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTG------GATCCATCGGATG 72130
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573
||||| || ||||| || | | | || | ||||| | |||| ||||||| ||
Sbjct 72129 GCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTATGTG 72070
Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633
| || | |||||||||| ||||||||| ||||| || ||||| || || ||||||||
Sbjct 72069 CG-CTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGAT 72011
Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||| || || ||||||||||||||| |||||
Sbjct 72010 GTTCTCCATCATGATCTGGAAGCCATAGAAGCA 71978
Score = 95.1 bits (104), Expect = 2e-13
Identities = 160/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976
|| ||| |||||| |||||||||||||| | || ||||| |||||| | |||
Sbjct 72597 ACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTCCATGAAGTCGAAG 72538
Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGA 794034
||||||| | | ||| ||||||| ||||| ||||| || || || || ||||
Sbjct 72537 GGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGACG--AGGAGACGATCAGCGA 72480
Query 794035 CGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGC 794093
|||| || |||||||| ||||||| || ||||||||||| || || || ||| ||
Sbjct 72479 CGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGAGCACAAGGG-AGA 72421
Query 794094 GACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
| ||| | | ||||| | ||| || ||||| ||| |||| ||
Sbjct 72420 GCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATAAT 72374
>seq65
Length=269349
Score = 122 bits (134), Expect = 1e-21
Identities = 90/105 (86%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
|||||||||||||||| ||||| || || ||| | || ||||||||||| |||||| | |
Sbjct 47128 CCAACTACCTCGACATTAAGCCTCTTCTGGATGTTGGATGCAAGACCGTCGCCAACATGA 47187
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||| | ||||| || |||||||||||||| |||||||
Sbjct 47188 TCAAGGGCAAGGCACCCGAAGAGATCCGCAAGACCTTCAACATCA 47232
>seq224
Length=57194
Score = 98.7 bits (108), Expect = 2e-14
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| ||||||||||||||||| |||||||||||| |||| || || || | |
Sbjct 4474 GTACTTGGTAACGGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCAAGCTCACCAGGAAG 4415
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| ||||| || | |||||||||||| ||||
Sbjct 4414 GATGAGGCGGACAGAGGTCTGGATCTCTCGGG 4383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916195233836159
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |