Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq221 150 3e-30 seq65 122 1e-21 seq224 98.7 2e-14 >seq221 Length=98460 Score = 150 bits (166), Expect = 3e-30 Identities = 236/333 (71%), Gaps = 15/333 (5%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||||| || || ||||||||||||||||| Sbjct 72301 ACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGCATGAGGCCGCGCTT 72242 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 794457 ||||||||| ||||||| | | || || | | ||| ||||| ||||| || || ||| Sbjct 72241 CTTGAGCCAGAAGATGGAA--GCAAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCA 72184 Query 794458 AAGCCGACGAGCCGCTCGGCAAA---AGTGTCCAGGCCCTCTTTGTTGATCCACTTCATC 794514 || | || || |||| ||||| || || | | ||| |||||| || Sbjct 72183 AAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTG------GATCCATCGGATG 72130 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573 ||||| || ||||| || | | | || | ||||| | |||| ||||||| || Sbjct 72129 GCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTATGTG 72070 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 | || | |||||||||| ||||||||| ||||| || ||||| || || |||||||| Sbjct 72069 CG-CTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGAT 72011 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||| || || ||||||||||||||| ||||| Sbjct 72010 GTTCTCCATCATGATCTGGAAGCCATAGAAGCA 71978 Score = 95.1 bits (104), Expect = 2e-13 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 || ||| |||||| |||||||||||||| | || ||||| |||||| | ||| Sbjct 72597 ACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTCCATGAAGTCGAAG 72538 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGA 794034 ||||||| | | ||| ||||||| ||||| ||||| || || || || |||| Sbjct 72537 GGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGACG--AGGAGACGATCAGCGA 72480 Query 794035 CGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGC 794093 |||| || |||||||| ||||||| || ||||||||||| || || || ||| || Sbjct 72479 CGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGAGCACAAGGG-AGA 72421 Query 794094 GACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 | ||| | | ||||| | ||| || ||||| ||| |||| || Sbjct 72420 GCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATAAT 72374 >seq65 Length=269349 Score = 122 bits (134), Expect = 1e-21 Identities = 90/105 (86%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||||||||| ||||| || || ||| | || ||||||||||| |||||| | | Sbjct 47128 CCAACTACCTCGACATTAAGCCTCTTCTGGATGTTGGATGCAAGACCGTCGCCAACATGA 47187 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||| | ||||| || |||||||||||||| ||||||| Sbjct 47188 TCAAGGGCAAGGCACCCGAAGAGATCCGCAAGACCTTCAACATCA 47232 >seq224 Length=57194 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||||||||| |||||||||||| |||| || || || | | Sbjct 4474 GTACTTGGTAACGGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCAAGCTCACCAGGAAG 4415 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| ||||| || | |||||||||||| |||| Sbjct 4414 GATGAGGCGGACAGAGGTCTGGATCTCTCGGG 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916195233836159