Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq46 131 1e-25
seq174 129 4e-25
seq61 98.7 6e-16
>seq46
Length=272426
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| |||| ||||||||| ||||| ||||| ||| |||| ||||
Sbjct 233974 AGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 234033
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| ||||| |||||||| | || | |||||||||||
Sbjct 234034 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 234093
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || |||| ||| || |||
Sbjct 234094 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 234153
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| |||||||||||||| || || |||||||||||
Sbjct 234154 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATGAT 234188
>seq174
Length=222900
Score = 129 bits (142), Expect = 4e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || ||| | || |||| || |||||||| ||||||||
Sbjct 54319 TCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAA 54378
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 54379 ATCAATCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 54438
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || | |||||| || | ||| |||||||| || ||||||||||| ||
Sbjct 54439 TCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACG 54498
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 54499 AAGATCTGCAT 54509
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| || ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 54011 AGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCC 54070
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 54071 TCGAGCTGCTTACCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 54130
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | ||| ||||||
Sbjct 54131 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 54190
Query 34946 TTTCCCGTGAGGGTCTTTAC 34965
|| || ||||||||||| ||
Sbjct 54191 TTGCCAGTGAGGGTCTTGAC 54210
Score = 100 bits (110), Expect = 2e-16
Identities = 143/199 (72%), Gaps = 8/199 (4%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||||||||| || || || || ||| | || | || || || ||||| ||||||||
Sbjct 54546 CTCCTTCTGAATATTGTAATCAGAGAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 54605
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| ||| |||||||| | || | ||||||||||| | || || || || |
Sbjct 54606 AATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTCAC--A 54663
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| | ||||| ||| | ||| || || | ||| |||||||| || || | |||||
Sbjct 54664 T--TGTCGATGGTATCAGATGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCT 54721
Query 34962 TTACAAAGATCTGCATGAT 34980
| || ||||||||||||||
Sbjct 54722 TGACGAAGATCTGCATGAT 54740
>seq61
Length=421038
Score = 98.7 bits (108), Expect = 6e-16
Identities = 134/185 (72%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| | || |||| || || ||||| ||||||||||
Sbjct 258731 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 258672
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| ||||| || | || | ||||||||||| | || || ||||| ||
Sbjct 258671 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 258615
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || | |||||| || | ||| |||||||| ||||| ||||||||
Sbjct 258614 -TGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 258556
Query 34964 ACAAA 34968
|| ||
Sbjct 258555 ACGAA 258551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690890727739
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |