Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq110 105 3e-17 >seq110 Length=189356 Score = 105 bits (116), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| ||||| || |||||||||||| |||||| Sbjct 154030 CTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGATAATGTC 154089 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 ||| ||| || | | ||||||||||||| || | | | | | ||| || Sbjct 154090 AGGAGTCAGACC---CTCTCTGCTGAAAGGCATATCCTCCTGTCGATAAGTAACACCGAT 154146 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 154147 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 154188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951962370347768