Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq174 93.3 3e-14
>seq174
Length=222900
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | || | ||| | ||| || ||| || || || |||||||| |||||
Sbjct 54282 ACCACCACGAAGGCGAAGCACGAGATGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGA 54341
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || || | ||| || ||||| |||||||| |||||||| || | ||
Sbjct 54342 GAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGGGG 54401
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| || || | | | ||| | ||||||| ||| || |
Sbjct 54402 AATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCGGATGACTCGA 54460
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || ||||| | || || || ||||||||||||
Sbjct 54461 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATA 54510
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||| | ||| || ||| ||| || || || |||||||| ||||| || || |||| ||
Sbjct 54528 CACGAGATGGAGTGTGGACTCCTTCTGAATATTGTAATCAGAGAGGGTTCGGCCGTCCTC 54587
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || ||||| |||||||| |||||||| || | || | || || |||||
Sbjct 54588 GAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 54647
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||| || |||| ||| ||| | ||| || ||| || || || | ||||| || |
Sbjct 54648 AATCTTGGACTTCA-CATTGTCGATGGTATCAGATGACTCAACCTCGAGGGTGATGGTCT 54706
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || || || || || |||||||||||
Sbjct 54707 TGCCGGTCAAGGTCTTGACGAAGATCTGCAT 54737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702073075520
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |