Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq174 132 5e-26
seq46 107 2e-18
seq61 95.1 1e-14
seq51 84.2 2e-11
>seq174
Length=222900
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | |||||| || || ||||||||||| ||||||||||||||| | ||| |
Sbjct 54292 AGGCGAAGCACGAGATGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGG 54351
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| ||||| || ||||| || |||||||| |||||||| || || || ||||| ||
Sbjct 54352 CCATCCTCGAGTTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGAATGCCCTCC 54411
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | |||||||| || || || ||||| ||
Sbjct 54412 TTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTG 54471
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || ||||| || |||||
Sbjct 54472 ATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 54509
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || |||||||||||| | ||| || ||| ||||||||
Sbjct 54019 GTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCCTCGAGCTG 54078
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || ||||| || | |||||||| || || || ||||| || || || ||||| ||
Sbjct 54079 CTTACCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTT 54138
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | ||||||||||| || || ||||| || ||||| || || ||
Sbjct 54139 GGACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 54198
Query 134690 TAAAGTTTTAACGA 134703
| || || ||||
Sbjct 54199 GAGGGTCTTGACGA 54212
>seq46
Length=272426
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||||| ||||| || ||||||||||||| | |||| | || ||||||||
Sbjct 233982 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTG 234041
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || ||||| || | |||||||| || || || || || || || || || || ||
Sbjct 234042 CTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 234101
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | |||||||| || ||||| || || || || || || || ||
Sbjct 234102 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 234161
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || |||||||| |||||
Sbjct 234162 GAGGGTCTTGACGAAAATCTGCAT 234185
>seq61
Length=421038
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | ||| | || |||||||| ||||| || || |
Sbjct 258731 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 258672
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| ||||||||||| || || ||||| || || || || || || ||||| ||
Sbjct 258671 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 258612
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| || ||||| || || || | || || ||||
Sbjct 258611 CGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 258552
Query 134704 AA 134705
||
Sbjct 258551 AA 258550
>seq51
Length=398837
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
||||||| |||| || | || ||||| | || | |||||| ||||| || ||
Sbjct 43249 CGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTCATGCTCTACAAGGATCACTG 43190
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
|||| ||| ||||| |||| ||| | || ||||| | || ||| |||||| ||||
Sbjct 43189 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAGCTCCAACCTGTGCACTGA 43130
Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402
||| | ||||| |||| || || || || ||||||||||| || || ||
Sbjct 43129 GATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTTGCAACCTTGCCTC 43079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395361292120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |