Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq51 86.0 2e-11
seq221 84.2 7e-11
>seq51
Length=398837
Score = 86.0 bits (94), Expect = 2e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||||||||||||| ||||| |||||||| || || || ||| ||
Sbjct 43602 CCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACCAGGGTGGTAACAAGCGA 43543
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082
|| || || ||| |||| ||||| ||||| ||||||||||||
Sbjct 43542 CCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCACGCCGAC 43501
>seq221
Length=98460
Score = 84.2 bits (92), Expect = 7e-11
Identities = 116/161 (72%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766
|||| || || |||||||||| || || || | || || || || |||| || |||
Sbjct 72168 AGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTT-GCTTCC 72226
Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826
||||||||| | || ||||| || || |||| ||||||| |||| ||||| || |||
Sbjct 72227 ATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATC 72286
Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| || |||||| | || ||||| ||||| || ||
Sbjct 72287 TCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCT 72327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588326211383045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |