Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq51 86.0 2e-11 seq221 84.2 7e-11 >seq51 Length=398837 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||||||||||||| ||||| |||||||| || || || ||| || Sbjct 43602 CCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACCAGGGTGGTAACAAGCGA 43543 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 || || || ||| |||| ||||| ||||| |||||||||||| Sbjct 43542 CCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCACGCCGAC 43501 >seq221 Length=98460 Score = 84.2 bits (92), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || |||||||||| || || || | || || || || |||| || ||| Sbjct 72168 AGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTT-GCTTCC 72226 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || ||||| || || |||| ||||||| |||| ||||| || ||| Sbjct 72227 ATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATC 72286 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| || |||||| | || ||||| ||||| || || Sbjct 72287 TCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCT 72327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588326211383045