Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq51 197 2e-45 seq221 87.8 2e-12 >seq51 Length=398837 Score = 197 bits (218), Expect = 2e-45 Identities = 1162/1844 (63%), Gaps = 45/1844 (2%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || || ||| |||| || ||||| |||||||| ||||||||||| | Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450 | | ||||| | | ||||| | || |||| ||| || || | |||| Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287 Query 110451 AGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGA 110510 | ||| | | ||| ||||| |||||| || || | || ||||| | | Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCA--- 42344 Query 110511 CATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567 || ||| || | || ||||| || || || ||| ||||||||| | |||| Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404 Query 110568 TATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGAGA---TCCTTCATATCC 110623 | | | ||| |||||||| ||||| || ||| || ||| | | ||||||| | Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCA----TCAGCAATGATACGGTTCTTCATACCA 42460 Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683 | |||||| ||||| || | || || |||| || |||||||| ||| Sbjct 42461 TCGGACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAAC 42520 Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 || || || ||| || | |||||||||| | ||||| || || ||||| || || Sbjct 42521 TCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTG 42580 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 || || | || || | ||| || || ||||| || || | | |||||||| || Sbjct 42581 TTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGG 42640 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTT 110861 | ||| | ||||| || |||| ||||| || | | | || || || Sbjct 42641 ATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAG-GGCTT 42699 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || |||| |||| |||||||| || | || | || || ||||| |||| ||||| Sbjct 42700 GACATTCC-ACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGG 42758 Query 110922 CATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 |||| ||| | | | || | | ||||| | |||| |||||||| || Sbjct 42759 AGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAGTA-AGGGCAGCGTGATAAATA 42817 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC 111040 || || ||||| | |||| ||| || || || ||||| | |||| Sbjct 42818 GTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGA 42877 Query 111041 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 111100 || || |||| || |||||||| ||||| | |||||| |||| ||| ||||| || Sbjct 42878 GCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTTG 42937 Query 111101 GACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 111157 || | ||| || ||| ||| || || || ||| || | ||| | || Sbjct 42938 --CTGTTGCG-AGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTTG 42994 Query 111158 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA 111217 | ||| | | |||| ||| || || || | | || | || || |||||| Sbjct 42995 CGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTTCA 43051 Query 111218 T---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 | ||| | || || | | || || | |||||||| || |||||| Sbjct 43052 TAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGG 43111 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | |||||| | ||| || || || | |||||| || || || || | |||||| Sbjct 43112 GCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTT 43171 Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 ||||| ||||| |||||| |||||||||||||||| |||| | || ||||| ||| Sbjct 43172 TGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTC 43231 Query 111395 TGTGATTTGAGAATAGCCTTCCAAACATCGGCGGC--TGGTACAATGGCGTTGGCCCGT- 111451 || | | |||||| || | ||||| | || || || | | ||| ||| | Sbjct 43232 TGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCGA---CCCTTG 43288 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 ||||| |||||||||| ||| || || |||||||| ||||| ||| | ||| Sbjct 43289 CCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGA 43348 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || || || || | ||||| ||||| || | ||| || ||||||||| Sbjct 43349 CCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATG 43408 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 || || || || ||||| || | || || || | | || |||| || | ||| Sbjct 43409 AAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 43468 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| ||| | ||||||||||| | || || ||||||||||||||||| || | Sbjct 43469 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATG 43528 Query 111692 GCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748 |||| | || ||| ||| | || | || || || || ||| ||| || Sbjct 43529 GCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAAC 43588 Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA 111808 || || ||||| |||| ||||| | || |||||| || || || ||| | Sbjct 43589 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCA 43648 Query 111809 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 111868 |||| | | ||| | || |||||||| |||||| ||| || || ||| Sbjct 43649 GTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCA 43708 Query 111869 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 111928 || | | ||||| | |||||||| | || ||||||||| | | | ||||||| Sbjct 43709 CAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAG 43768 Query 111929 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 111988 || || | || || ||| ||||| || ||||| | || || | || ||| || Sbjct 43769 CATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTG 43828 Query 111989 AACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 112046 | | | |||| ||||| || |||||| ||||||||| ||||| | || || Sbjct 43829 A--AGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGACACGCTCAATATTGTCACCCC 43886 Query 112047 GGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGA 112106 ||| |||| ||||| ||||||| ||| | ||| ||| || | |||| || | Sbjct 43887 AGATACCGACAGCGACTCGCATGATCATATGCTGCGGGCGCTCGGCAATTTTGCCGTCAA 43946 Query 112107 GCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 112150 | || |||||||||| | ||||| ||| |||||| ||| Sbjct 43947 TCTGTAGAAGATAGCTTCTAGACAGGGTCCTGAAACCAAAATAA 43990 >seq221 Length=98460 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| ||||||||||| || || || || || || || |||| ||||| Sbjct 72319 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACC 72260 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 |||||||| || |||||||| | ||| | || | ||| || | || |||||||| Sbjct 72259 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCACTGAAGAAGA 72201 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCA 122835 ||||||| ||| ||||| || | ||| || | || ||||| ||| ||| | | Sbjct 72200 TACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGA-AGAGTTCTTGTCCTGG 72142 Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTT 122864 | |||| || ||||| | ||||||||| Sbjct 72141 ATCCATCGGATGGCCCAATCCGCCTTCTT 72113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028223957600