Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq51 219 5e-52 seq73 82.4 9e-11 >seq51 Length=398837 Score = 219 bits (242), Expect = 5e-52 Identities = 1094/1722 (64%), Gaps = 49/1722 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| ||||| || |||| || |||||||||||||| || |||||||| | Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||||| || | ||||| || | |||| | || || | |||| Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 | ||| | | || || || ||||||||| || || ||||| ||||| | || Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTG---CA 42344 Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 || ||| || || |||||||||||| |||| || ||| ||||| | |||| Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404 Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 | | ||| || ||||| || ||||| | | || | | ||||||| | | | Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACT 118158 |||| ||||| || | ||||||| |||| || |||||||| |||| Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCTT---GAGAAGCCAGGGGTTGACAACTTGGAACT 42521 Query 118159 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218 | || || ||| || | | ||||| |||| ||||| ||||| |||||||| |||| Sbjct 42522 CGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGT 42581 Query 118219 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278 | || | || || | || || |||||||| || || | ||| || ||||| |||| Sbjct 42582 TGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGA 42641 Query 118279 GACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTC 118336 ||| | | | | || ||||| ||||| || | | | || | || Sbjct 42642 TACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAG--GGCTT 42699 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | | |||||||||||||||||| || || | || || || || |||| || || Sbjct 42700 GACATTCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGA 42759 Query 118397 ATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 || || ||||| ||| || | | | ||| | | ||||| |||||||| || Sbjct 42760 GTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAGTA---AGGGCAGCGTGATAAAT 42816 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || || || || | |||| | |||||| || ||||| | | ||| Sbjct 42817 AGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAG 42876 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 || || |||| || ||||||||||||||||| ||||| || || || | ||| || Sbjct 42877 AGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTT 42936 Query 118574 AGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633 || ||||| | || || || || ||||||| | | || | || Sbjct 42937 GCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTT--- 42993 Query 118634 GGTGACAAC--CTTT-GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 | |||||| ||| |||| ||| || ||||| | | | || | || || ||||| Sbjct 42994 GCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTTC 43050 Query 118691 AT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747 || ||| | ||| || | | || || || || || || | | |||||| Sbjct 43051 ATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGG 43110 Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807 | |||||| ||||| || ||||||| ||| || || ||||| || | |||||| Sbjct 43111 GGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTT 43170 Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867 ||| || ||| ||| || ||||||||| |||||| | || | || ||||| || Sbjct 43171 TTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGT 43230 Query 118868 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGC 118925 |||| || |||||| || | ||| | | ||| || | | | ||| || || Sbjct 43231 CTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCGACC-CTTGC 43289 Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985 || ||| |||||||||| ||| || || |||||||| ||||| | || | || Sbjct 43290 CC-TCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGA 43348 Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 || || || | ||||| | |||| ||||| || || ||| || ||||||||| Sbjct 43349 CCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATG 43408 Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 ||||| || |||||||| || || ||| || || ||| ||| | || || | || Sbjct 43409 AAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 43468 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165 || || || | || | || || | || || |||||||| || || ||||| | Sbjct 43469 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATG 43528 Query 119166 GCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAAT 119222 |||| | || || |||| |||||| || || | |||||| ||| || Sbjct 43529 GCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAAC 43588 Query 119223 ACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 119280 ||||| ||||| |||| |||||| | ||| ||||| || || ||| || ||| | Sbjct 43589 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC- 43647 Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340 | |||| | || |||| | || |||||||| || ||| ||| || || | Sbjct 43648 -AGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGG 43706 Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400 | || | ||||| | ||||||| ||||| || ||| |||| | | | |||| Sbjct 43707 CACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGA 43766 Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460 |||| || | ||||||| || ||||| |||||||| | ||| || |||| || Sbjct 43767 AGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAG 43826 Query 119461 TGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500 ||| | | |||| ||||| || ||| || |||||||| Sbjct 43827 TGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGAC 43866 >seq73 Length=346706 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTC 14295 ||||| ||| ||||| || |||||||| | |||||| || || | ||| | | | Sbjct 210847 ACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGC 210906 Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355 || | ||||||||| | | | || ||||| ||||||||||| || || | || | Sbjct 210907 GAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACC 210966 Query 14356 G-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414 | ||| | || |||||| || ||| |||||||| ||||| ||| || | |||| Sbjct 210967 GCTCACACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCT 211025 Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | || || || || || || | || ||||| || |||||| ||||||| Sbjct 211026 TACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431481658360