Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq51 219 5e-52
seq73 82.4 9e-11
>seq51
Length=398837
Score = 219 bits (242), Expect = 5e-52
Identities = 1094/1722 (64%), Gaps = 49/1722 (3%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| ||||| || |||| || |||||||||||||| || |||||||| |
Sbjct 42168 TGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGAC 42227
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| || | ||||| || | |||| | || || | ||||
Sbjct 42228 CGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGT 42287
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
| ||| | | || || || ||||||||| || || ||||| ||||| | ||
Sbjct 42288 GAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTG---CA 42344
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
|| ||| || || |||||||||||| |||| || ||| ||||| | ||||
Sbjct 42345 CAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101
| | ||| || ||||| || ||||| | | || | | ||||||| | | |
Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACT 118158
|||| ||||| || | ||||||| |||| || |||||||| ||||
Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCTT---GAGAAGCCAGGGGTTGACAACTTGGAACT 42521
Query 118159 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218
| || || ||| || | | ||||| |||| ||||| ||||| |||||||| ||||
Sbjct 42522 CGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGT 42581
Query 118219 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278
| || | || || | || || |||||||| || || | ||| || ||||| ||||
Sbjct 42582 TGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGA 42641
Query 118279 GACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTC 118336
||| | | | | || ||||| ||||| || | | | || | ||
Sbjct 42642 TACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAG--GGCTT 42699
Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396
| | |||||||||||||||||| || || | || || || || |||| || ||
Sbjct 42700 GACATTCCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGA 42759
Query 118397 ATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453
|| || ||||| ||| || | | | ||| | | ||||| |||||||| ||
Sbjct 42760 GTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAGTA---AGGGCAGCGTGATAAAT 42816
Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513
|| || || || | |||| | |||||| || ||||| | | |||
Sbjct 42817 AGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAG 42876
Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573
|| || |||| || ||||||||||||||||| ||||| || || || | ||| ||
Sbjct 42877 AGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTT 42936
Query 118574 AGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633
|| ||||| | || || || || ||||||| | | || | ||
Sbjct 42937 GCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTT--- 42993
Query 118634 GGTGACAAC--CTTT-GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690
| |||||| ||| |||| ||| || ||||| | | | || | || || |||||
Sbjct 42994 GCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTA---GCAAGCATCTTC 43050
Query 118691 AT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747
|| ||| | ||| || | | || || || || || || | | ||||||
Sbjct 43051 ATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGG 43110
Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807
| |||||| ||||| || ||||||| ||| || || ||||| || | ||||||
Sbjct 43111 GGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTT 43170
Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867
||| || ||| ||| || ||||||||| |||||| | || | || ||||| ||
Sbjct 43171 TTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGT 43230
Query 118868 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGC 118925
|||| || |||||| || | ||| | | ||| || | | | ||| || ||
Sbjct 43231 CTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTGATAGACTTGCGACC-CTTGC 43289
Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985
|| ||| |||||||||| ||| || || |||||||| ||||| | || | ||
Sbjct 43290 CC-TCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATCACCGTAGCAGTCAGCAAGA 43348
Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045
|| || || | ||||| | |||| ||||| || || ||| || |||||||||
Sbjct 43349 CCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATG 43408
Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105
||||| || |||||||| || || ||| || || ||| ||| | || || | ||
Sbjct 43409 AAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 43468
Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165
|| || || | || | || || | || || |||||||| || || ||||| |
Sbjct 43469 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATG 43528
Query 119166 GCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAAT 119222
|||| | || || |||| |||||| || || | |||||| ||| ||
Sbjct 43529 GCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAAC 43588
Query 119223 ACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 119280
||||| ||||| |||| |||||| | ||| ||||| || || ||| || ||| |
Sbjct 43589 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC- 43647
Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340
| |||| | || |||| | || |||||||| || ||| ||| || || |
Sbjct 43648 -AGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGG 43706
Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400
| || | ||||| | ||||||| ||||| || ||| |||| | | | ||||
Sbjct 43707 CACAAGTCTTGAGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGA 43766
Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460
|||| || | ||||||| || ||||| |||||||| | ||| || |||| ||
Sbjct 43767 AGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAG 43826
Query 119461 TGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500
||| | | |||| ||||| || ||| || ||||||||
Sbjct 43827 TGA--AGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGAC 43866
>seq73
Length=346706
Score = 82.4 bits (90), Expect = 9e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTC 14295
||||| ||| ||||| || |||||||| | |||||| || || | ||| | | |
Sbjct 210847 ACCGATGGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGC 210906
Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355
|| | ||||||||| | | | || ||||| ||||||||||| || || | || |
Sbjct 210907 GAATAGATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACC 210966
Query 14356 G-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414
| ||| | || |||||| || ||| |||||||| ||||| ||| || | ||||
Sbjct 210967 GCTCACACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCT 211025
Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| || || || || || || | || ||||| || |||||| |||||||
Sbjct 211026 TACCAGTACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431481658360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |