Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq51 205 1e-47
seq221 158 1e-33
seq30 100 3e-16
seq73 89.7 6e-13
>seq51
Length=398837
Score = 205 bits (226), Expect = 1e-47
Identities = 989/1561 (63%), Gaps = 45/1561 (3%)
Strand=Plus/Minus
Query 104155 TTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTCTTGAT 104214
|||||||||| ||| ||||| | |||||||||| || | | || || |
Sbjct 43990 TTATTTTGGTTTCAGGACCCTGTCTAGAAGCTATCTTCTACAGATTGACGGCAAAATTGC 43931
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
|| ||| ||| | ||| ||||||| || || ||||||| || || | |||||
Sbjct 43930 CGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGA 43871
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 104332
||||||||| |||||| || ||||| |||| | | ||| ||| || | ||
Sbjct 43870 GCGTGTCTTGGAAACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCC 43813
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| | ||||| || ||||| ||| || ||| | || ||||||||| | | |
Sbjct 43812 ACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATG 43753
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
||||||||| || | |||||||| | ||||| | | ||||| || || |||
Sbjct 43752 AAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAG 43693
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
|||||| |||||||| || | ||| | | |||| | ||| ||
Sbjct 43692 ATGGCTGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCC 43633
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| || |||||| || | ||||| |||| ||||| || || || ||| ||| ||
Sbjct 43632 GGTACCAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCT 43573
Query 104573 CGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629
|| || || | || | ||| ||| || | |||| | || |||||||||
Sbjct 43572 CGTTACGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCA 43513
Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG-- 104687
|||||||| || || | ||||||||||| | || ||||| ||| | |||||||
Sbjct 43512 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 43453
Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|||| | || || || ||| |||||| ||||| || ||||||||||||||| | || |
Sbjct 43452 CGCGCT--CGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCG 43395
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
|| ||| ||| | ||| |||| | || || || || |||||||| | || |
Sbjct 43394 AGAAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCT 43335
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA 104867
||||| |||||||| || || ||| |||||||||| || ||| | | | | || |
Sbjct 43334 ACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAG-AGGGCAAGGGTC-GCAA 43277
Query 104868 CGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925
| || ||| | | ||| | || |||||| || | || || ||||| || |
Sbjct 43276 GTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAA 43217
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|| | |||||| ||||| || ||| |||| ||||| || |||||||| | |||
Sbjct 43216 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTAC 43157
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
||| || ||||| || || || || || | || | | | |||||| ||
Sbjct 43156 CATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGC 43097
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGAC 105096
|| || ||||| || || | |||| || ||| |||| ||| | |
Sbjct 43096 CGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATGC--TTGC 43039
Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156
| ||| || | | || || |||||||| || || || | ||| | ||
Sbjct 43038 TACGAC--TTCA-----AGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAA 42986
Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216
|| |||| || || ||||| ||| | ||||| || || ||| | ||
Sbjct 42985 CAAGATTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCA 42926
Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276
||| || |||||||||||||| || ||||| || |||| ||| || | ||| |
Sbjct 42925 CCGACCCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCC 42866
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
||||| || ||| || || | || || || || ||||| || ||||||||
Sbjct 42865 CTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGC 42806
Query 105337 CGCTCTTGAGGCGAGTTCAG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393
|| ||| | | || | || | || ||| || ||||| || ||||| |
Sbjct 42805 TGCCCTT---ACTACCTCTGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAA 42749
Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453
||| ||||| || || | || | || || |||||||||||| | | || ||
Sbjct 42748 GGGCTCTCCTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGA 42689
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
|| | || |||||| ||||| || ||||| | ||| | || ||||||||
Sbjct 42688 TCTTTGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCT 42629
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
||| | ||||| ||||| || || ||| | || || | || || || || |||||
Sbjct 42628 GCTCGTTGCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTT 42569
Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
|| |||||||| | |||||||| | | || ||| || || ||||| ||||
Sbjct 42568 CGAGCCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGT 42509
Query 105634 CAA---CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690
||| | || |||| |||| || || || ||||| |||||| | | ||||||
Sbjct 42508 CAACCCCTGGCTTCTCAAGGAT---CTTGTCGACATGGGTCTTTGGTCCGATGGTATGAA 42452
Query 105691 G 105691
|
Sbjct 42451 G 42451
>seq221
Length=98460
Score = 158 bits (174), Expect = 1e-33
Identities = 355/522 (68%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497
||||| ||||| ||| | |||||||| |||||| | |||| ||||| | ||| | |
Sbjct 71801 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTTCACGACTGGAACAACCGTCTGACT 71860
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
| | || | | ||||| |||| || || ||||| |||| |||||||| ||
Sbjct 71861 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATC 71920
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| || | | || | ||||| || |||| | || || |||
Sbjct 71921 GTCAACGAGAACCTCGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 71979
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||||| | ||| |||| ||| | | | || || |||||| ||||
Sbjct 71980 CTTCTATGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAAACATACTCCCTGCTCA 72038
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735
| |||| || || ||||| |||| || | | ||||| | ||| | | ||
Sbjct 72039 TTGACACCTACATCAAGGACCCTGCTCAGCGCACATACCTCTTCAACGCCGTTGACACCA 72098
Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 94794
|||| || || | |||||| ||||||||||| || ||| | | |||| | | |
Sbjct 72099 TTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTC-T 72157
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
||||||||| |||| || | || ||||| ||||||||||||||||||| |||| ||
Sbjct 72158 TCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCC 72217
Query 94855 TTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913
|| ||| | || | |||||||||||||| || |||||||| ||||| |||| |||||
Sbjct 72218 TT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAA 72276
Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| ||||||||||| ||||| || ||| || |||||
Sbjct 72277 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 72318
>seq30
Length=356529
Score = 100 bits (110), Expect = 3e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817
||||| || || || |||||||| || ||||||||||| ||||| |||| | || |
Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301
Query 9818 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9876
|||| | || |||||| ||| | |||||| |||| |||||| || ||||| |||||
Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241
Query 9877 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 9936
||| ||||| || ||| | |||||| |||| |||| |||||| || |
Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACCGAGGTCGCT 46181
Query 9937 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGC 9990
| | ||||||| | ||| | ||| || || | ||| | | ||| || |||||
Sbjct 46180 GAACTTCTCAGGGTTCTTCAAAAATTCGACGACTTCCTGGAGTTCTTCCTTGGC 46127
>seq73
Length=346706
Score = 89.7 bits (98), Expect = 6e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
|||||||||||| || ||||||| ||| || || || | ||| | | | || ||
Sbjct 210853 GGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGCGAATAG 210912
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821
||| || |||||| | || ||||||||||||||||| || || | | || ||
Sbjct 210913 ATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 210972
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
| | || |||||| || ||| |||||||| ||||| ||| || | |||||||| |
Sbjct 210973 ACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCTTACCAG 211031
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||| || || || | | |||||||| || |||||||| ||
Sbjct 211032 TACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257293144440
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