Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq51 205 1e-47 seq221 158 1e-33 seq30 100 3e-16 seq73 89.7 6e-13 >seq51 Length=398837 Score = 205 bits (226), Expect = 1e-47 Identities = 989/1561 (63%), Gaps = 45/1561 (3%) Strand=Plus/Minus Query 104155 TTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTCTTGAT 104214 |||||||||| ||| ||||| | |||||||||| || | | || || | Sbjct 43990 TTATTTTGGTTTCAGGACCCTGTCTAGAAGCTATCTTCTACAGATTGACGGCAAAATTGC 43931 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 || ||| ||| | ||| ||||||| || || ||||||| || || | ||||| Sbjct 43930 CGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGA 43871 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 104332 ||||||||| |||||| || ||||| |||| | | ||| ||| || | || Sbjct 43870 GCGTGTCTTGGAAACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCC 43813 Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392 || | ||||| || ||||| ||| || ||| | || ||||||||| | | | Sbjct 43812 ACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATG 43753 Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452 ||||||||| || | |||||||| | ||||| | | ||||| || || ||| Sbjct 43752 AAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAG 43693 Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512 |||||| |||||||| || | ||| | | |||| | ||| || Sbjct 43692 ATGGCTGGTGGTATTGGCTTGAATGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCC 43633 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || |||||| || | ||||| |||| ||||| || || || ||| ||| || Sbjct 43632 GGTACCAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCT 43573 Query 104573 CGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || || | || | ||| ||| || | |||| | || ||||||||| Sbjct 43572 CGTTACGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCA 43513 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG-- 104687 |||||||| || || | ||||||||||| | || ||||| ||| | ||||||| Sbjct 43512 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 43453 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 |||| | || || || ||| |||||| ||||| || ||||||||||||||| | || | Sbjct 43452 CGCGCT--CGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCG 43395 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||| ||| | ||| |||| | || || || || |||||||| | || | Sbjct 43394 AGAAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCT 43335 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA 104867 ||||| |||||||| || || ||| |||||||||| || ||| | | | | || | Sbjct 43334 ACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAG-AGGGCAAGGGTC-GCAA 43277 Query 104868 CGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 | || ||| | | ||| | || |||||| || | || || ||||| || | Sbjct 43276 GTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAA 43217 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||| ||||| || ||| |||| ||||| || |||||||| | ||| Sbjct 43216 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTAC 43157 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 ||| || ||||| || || || || || | || | | | |||||| || Sbjct 43156 CATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGC 43097 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGAC 105096 || || ||||| || || | |||| || ||| |||| ||| | | Sbjct 43096 CGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATGC--TTGC 43039 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 | ||| || | | || || |||||||| || || || | ||| | || Sbjct 43038 TACGAC--TTCA-----AGAAGCTACACGAAGTCACTCAAGTCGTTGTCCGCAACTTGAA 42986 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || |||| || || ||||| ||| | ||||| || || ||| | || Sbjct 42985 CAAGATTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGCAACATGCGTCA 42926 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 ||| || |||||||||||||| || ||||| || |||| ||| || | ||| | Sbjct 42925 CCGACCCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCC 42866 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||||| || ||| || || | || || || || ||||| || |||||||| Sbjct 42865 CTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTATCACGC 42806 Query 105337 CGCTCTTGAGGCGAGTTCAG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 || ||| | | || | || | || ||| || ||||| || ||||| | Sbjct 42805 TGCCCTT---ACTACCTCTGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAA 42749 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 ||| ||||| || || | || | || || |||||||||||| | | || || Sbjct 42748 GGGCTCTCCTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCTCTGA 42689 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 || | || |||||| ||||| || ||||| | ||| | || |||||||| Sbjct 42688 TCTTTGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCT 42629 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 ||| | ||||| ||||| || || ||| | || || | || || || || ||||| Sbjct 42628 GCTCGTTGCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTT 42569 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || |||||||| | |||||||| | | || ||| || || ||||| |||| Sbjct 42568 CGAGCCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAAGTTGT 42509 Query 105634 CAA---CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 ||| | || |||| |||| || || || ||||| |||||| | | |||||| Sbjct 42508 CAACCCCTGGCTTCTCAAGGAT---CTTGTCGACATGGGTCTTTGGTCCGATGGTATGAA 42452 Query 105691 G 105691 | Sbjct 42451 G 42451 >seq221 Length=98460 Score = 158 bits (174), Expect = 1e-33 Identities = 355/522 (68%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||| ||||| ||| | |||||||| |||||| | |||| ||||| | ||| | | Sbjct 71801 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTTCACGACTGGAACAACCGTCTGACT 71860 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 | | || | | ||||| |||| || || ||||| |||| |||||||| || Sbjct 71861 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATC 71920 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||||| || | | || | ||||| || |||| | || || ||| Sbjct 71921 GTCAACGAGAACCTCGTTGAGCGTTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 71979 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||||| | ||| |||| ||| | | | || || |||||| |||| Sbjct 71980 CTTCTATGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAAACATACTCCCTGCTCA 72038 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735 | |||| || || ||||| |||| || | | ||||| | ||| | | || Sbjct 72039 TTGACACCTACATCAAGGACCCTGCTCAGCGCACATACCTCTTCAACGCCGTTGACACCA 72098 Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 94794 |||| || || | |||||| ||||||||||| || ||| | | |||| | | | Sbjct 72099 TTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTC-T 72157 Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||||||| |||| || | || ||||| ||||||||||||||||||| |||| || Sbjct 72158 TCCTTTGCTCAGCGTCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCC 72217 Query 94855 TTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 || ||| | || | |||||||||||||| || |||||||| ||||| |||| ||||| Sbjct 72218 TT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAA 72276 Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| ||||||||||| ||||| || ||| || ||||| Sbjct 72277 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 72318 >seq30 Length=356529 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 ||||| || || || |||||||| || ||||||||||| ||||| |||| | || | Sbjct 46359 AAGAGCTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCGCTACC 46301 Query 9818 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9876 |||| | || |||||| ||| | |||||| |||| |||||| || ||||| ||||| Sbjct 46300 AGACATGTAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGCGTCTT 46241 Query 9877 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 9936 ||| ||||| || ||| | |||||| |||| |||| |||||| || | Sbjct 46240 ACCGGTACCGGGAGGACCAACCAGGAGGACACCCTTGGGAAGCTTGGCACCGAGGTCGCT 46181 Query 9937 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGC 9990 | | ||||||| | ||| | ||| || || | ||| | | ||| || ||||| Sbjct 46180 GAACTTCTCAGGGTTCTTCAAAAATTCGACGACTTCCTGGAGTTCTTCCTTGGC 46127 >seq73 Length=346706 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 |||||||||||| || ||||||| ||| || || || | ||| | | | || || Sbjct 210853 GGCATCAATCTCGTCGATGAAGATGATACAAGGAGCGTTCTTACGACCCTCGGCGAATAG 210912 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821 ||| || |||||| | || ||||||||||||||||| || || | | || || Sbjct 210913 ATCTCGCACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 210972 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | | || |||||| || ||| |||||||| ||||| ||| || | |||||||| | Sbjct 210973 ACT-GAAGAAGGGCACTCCAGACTCACCCGCCGTGGCTTTGGCAAGCAACGTCTTACCAG 211031 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| || || || | | |||||||| || |||||||| || Sbjct 211032 TACCAGGGGGTCCAGCCAAAATAGCACCTCGCGGGATCTTGGCACC 211077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257293144440