Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq51 374 1e-98 seq221 111 2e-19 >seq51 Length=398837 Score = 374 bits (414), Expect = 1e-98 Identities = 1133/1733 (65%), Gaps = 49/1733 (3%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 42195 GTGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 42254 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| |||||||||| Sbjct 42255 TGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGA 42314 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 42315 TGAAGGCACCACGGTCCGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 42374 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | || | |||||| | | ||| | | | ||| | Sbjct 42375 TCTTGTACAGAGCCTTGATATCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCACC 42432 Query 78426 TCGCACAATTTCA---TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482 |||| | ||||| || | | ||| || || | ||||||| Sbjct 42433 ATCAGCAATGATACGGTTCTTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTT 42492 Query 78483 GA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGA 78538 || ||||| |||| | | ||||||||| || ||| ||||| |||||| Sbjct 42493 GAGAAGCCAGG----GGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGA 42548 Query 78539 TGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGG 78598 |||||| ||||| |||||||| ||||||||| || | ||||| | ||| || | Sbjct 42549 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAG 42608 Query 78599 TCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGA-----TCTCG-A 78652 | ||||| || || || || ||| || || | ||| || ||||||| ||||| | Sbjct 42609 TGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGA 42668 Query 78653 CCTTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATAC 78712 | | ||||||| ||| | | || |||||| || || || || | Sbjct 42669 GAGATTCCCACTCCCAAAGATCAGAGGGCTTGACATTCCACATATCAAACTGGAGAATGC 42728 Query 78713 CCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGC 78772 |||| || || || || |||||||| || ||| | ||||||||||||||||| | || Sbjct 42729 CCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCT-GC 42787 Query 78773 ATGACTCGAGCA-GGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGC 78831 | || | |||| ||||| || | || ||||||||| |||||| ||||| || Sbjct 42788 ACAGAGGTAGTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGA 42847 Query 78832 GCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891 |||| || || || | | || ||| | |||| |||| || || || ||||| Sbjct 42848 GCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACA 42907 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAG 78951 |||| | | || |||||||| ||||||||||| || || ||| | | ||||| | Sbjct 42908 CCGAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGAACAGGGTAGTGG 42967 Query 78952 TTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTG 79011 || ||||| | ||||| ||| || ||||| |||| || |||| | || Sbjct 42968 TTGACGTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTC 43027 Query 79012 GCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCAGG 79065 ||| || | | || ||| | |||||||||| || || ||| || || ||| Sbjct 43028 TTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAAGG 43087 Query 79066 TTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125 ||||| ||||| ||| || ||| | ||| || || || ||||||| || || Sbjct 43088 TTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAG 43147 Query 79126 GACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGC 79183 ||| |||||| || | |||||| ||||||||||| ||| ||| ||||||||| Sbjct 43148 --CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 43205 Query 79184 ACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGG 79243 |||| | || | |||||||| ||| || ||||| | ||| ||| | | | | Sbjct 43206 GCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAG 43265 Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303 || || | ||| | |||| | ||||| | ||||| | | || Sbjct 43266 CCTTGATAGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACT 43325 Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363 | || || ||| || | || || |||||||||| |||||||| || ||| || Sbjct 43326 CATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGC 43385 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 ||| |||||| || || ||||||||| || |||||||| || || ||| ||||| | Sbjct 43386 CGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCAC 43445 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | || | |||||| | || |||||| || || || || || || | || ||||| Sbjct 43446 GAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGG 43505 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 ||||||| ||||| || || |||||||| | ||| |||||| || ||||||| || Sbjct 43506 CGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGA 43565 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 |||| || || ||||||||||| || || |||||||| ||||| |||| || || | Sbjct 43566 CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCAT 43625 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG--ATT----CCGA 79657 | || ||| ||| | || | || || | |||| |||| ||| || | Sbjct 43626 TGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCG----GTGGGCATTCAAGCCAA 43679 Query 79658 TGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGA 79717 | || || | | |||||| || || || |||||| || |||||||| || || | Sbjct 43680 TACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAA 43739 Query 79718 TCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGG 79777 | ||| ||||||||| | || |||||||| || | || || | ||||||| Sbjct 43740 TGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGG 43799 Query 79778 CGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGT 79835 ||||||| | || || |||| || ||||||||||| ||| ||| || | ||| || Sbjct 43800 CGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGT 43857 Query 79836 CTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 ||| ||| ||| | | ||| || ||| ||||| ||||| ||||||| Sbjct 43858 TTCCAAGACACGCTCAATATTGTCACCCCAGATACCGACAGCGACTCGCATGA 43910 Score = 327 bits (362), Expect = 1e-84 Identities = 908/1376 (66%), Gaps = 30/1376 (2%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||||||||| ||||| ||| || ||| | | ||| ||| || |||||| Sbjct 43910 TCATGCGAGTCGCTGTCGGTATCTGGGGTGACAATATTGAGCGTGTCTTGGAAACATACA 43851 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| | || ||||||||||| || |||| || || | |||||||||||||| Sbjct 43850 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCGAGCCCCACTTTATTCAACGCCGGTACC 43792 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || || | || || ||||| || | ||||||||| ||||||||||| || Sbjct 43791 CCACAGCCTCAACTATCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 43732 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 |||||||| || |||||| || || || |||||| | | || ||||| || | Sbjct 43731 ATCTACGATACTCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 43672 Query 19355 CACTGCTC---GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 | ||| | |||| ||| | | ||| | ||| || || || || || Sbjct 43671 AA-TGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCC 43615 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 |||||||||| || ||||| || || ||||||||||| || | |||||| ||||||| Sbjct 43614 AACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACCAGGGT 43555 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 || ||| || || | |||||||| ||||| |||||||||||||| |||||| | Sbjct 43554 GGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCACGCCGACGTCTTC 43495 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || ||||| || || || |||||| ||| | |||||| | ||| ||| ||||| ||| Sbjct 43494 GAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTC 43435 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 || | ||||| || || || |||||| || || |||||| ||| |||||| Sbjct 43434 CTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGAATGGACT 43375 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || |||||||| |||| |||||||| || | ||| |||||| || | ||| | | Sbjct 43374 CTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGAGTTTGAGGCT 43315 Query 19712 TTGTACCGGACTTACGTAGCCCAGGGC-CGGTTCAAGAAGGTGGTCCGGGCCCGGGACGT 19770 ||||| | |||| ||||| || || ||| || ||| | | | Sbjct 43314 CTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTC-GCAAGTCTATCAAGGCTCAAAAACT 43256 Query 19771 CTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA 19830 ||| || | | ||| | |||| |||||||| | || | |||| ||||||||| Sbjct 43255 TTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTCATGCTCTACAAGGA 43196 Query 19831 -CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCT 19887 | | || ||| |||| || || |||||| | || | ||| ||| |||||||| Sbjct 43195 TCACTGC-AACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCT 43139 Query 19888 GTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 ||| ||||| || || ||| | | || || ||| ||||| || || || || || Sbjct 43138 GTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTTGCAACCTTGCCTC 43079 Query 19948 CCTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001 | ||| ||||| ||||| ||| | | | | || |||||| || | | Sbjct 43078 CTTGTCTCTGCCTTCTTTCATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTACA 43019 Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC 20061 ||| || || | ||||| || || |||| | ||||| ||| ||||| Sbjct 43018 CGAAGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGATTATCGACGTCAACCACTACCC 42959 Query 20062 GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGG 20121 | | ||| ||||| || ||||| ||||| || || | |||| ||||| || Sbjct 42958 TGTTCAAGAGGCTCGCAACAGCAACATGCGTCACCGACCCATTGGTCTCGGTGTCCAAGG 42899 Query 20122 CCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCT 20181 || || || | ||| | ||| || | | || || |||| |||| || ||||| Sbjct 42898 TCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCT 42839 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCG 20240 |||||| ||||||||| | | || ||||| |||| | || |||| | |||| Sbjct 42838 GAACAAGCAAATCTTCGAGACTATTTATCACGCTGCCCTTACTACCTCTGTGC-AGCTCG 42780 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 |||| ||||| || || ||| || |||||||| || || || || ||||| || |||| Sbjct 42779 CCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCCTGCCTCTGAGGGCATTCTCC 42720 Query 20301 AGCCGGACATGTGGGGCGTCACTGAGAATGA-GTTTTGGAGCG-----CCCTCAAGGTTG 20354 || || |||||| |||| ||| ||| |||| | | ||| | | Sbjct 42719 AGTTTGATATGTGGAATGTCAAGCCCTCTGATCTTTGGGAGTGGGAATCTCTCCGAGAGG 42660 Query 20355 AGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGA 20414 | ||||||| ||||| | |||||| ||||||| || || ||||| || || | Sbjct 42659 ATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCCACTGCTAGTA 42600 Query 20415 CCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 || | ||||| | || ||||||||| |||||||| ||||| ||||||||||| Sbjct 42599 CCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTAC 42544 >seq221 Length=98460 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 59970 TCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTC 60028 || ||||| || ||||| |||||||||| ||| || || || ||||||||| ||| | Sbjct 72158 TCCTTTGCTCAGCGTCTTGTAGCTTTTGC-TGCTGTTGAGGGTATCTTCTTCAGTGGTGC 72216 Query 60029 GTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAA 60088 || | | || ||||||||||| ||||| ||||||||||| || ||||| || ||||| Sbjct 72217 CTTTGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAA 72276 Query 60089 CGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||| || || || || ||||| || || Sbjct 72277 CGAGCTCATCTCTCGTGATGAGGGTCTTCA 72306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521501994640