Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq174 104 2e-17
>seq174
Length=222900
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || || || || || || | |||
Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| || || || ||
Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||||||||| ||| | || || | ||| | ||||| ||||||
Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | ||| | || | || | || ||||| ||
Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTGCTTCGCCTTCGTGGTGGTAT 54280
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || || || | ||
Sbjct 54738 CATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCATC 54679
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | || || || ||||| ||||| || ||||| || || || ||
Sbjct 54678 TGATACCATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 54619
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| || || | ||||||||| || | || ||| | ||| | || ||||||||
Sbjct 54618 GCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCTCTGATTACAA 54559
Query 27167 CATTCAAAAGGAGTCGAC 27184
||||| |||||||| ||
Sbjct 54558 TATTCAGAAGGAGTCCAC 54541
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || || || || |||||| | || || || || || || |||||||| | || ||
Sbjct 54210 GTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 54151
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| ||||| || ||||| ||||| || ||||| || || || || ||||| | ||
Sbjct 54150 AACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTTATC 54091
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| || || || || | || ||| || ||| | ||||| |||||||| || ||||||
Sbjct 54090 TTTGCTGGTAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAG 54031
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| | || ||||| | ||| | || |||||
Sbjct 54030 TCGACTCTTCACTTGGTCCTCCGTCTTCGTGGTGG 53996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915785053120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |