Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq51 174 2e-38 seq221 113 6e-20 >seq51 Length=398837 Score = 174 bits (192), Expect = 2e-38 Identities = 1055/1677 (63%), Gaps = 33/1677 (2%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| || |||||||| || || || ||||| || |||| || ||| |||||||| Sbjct 42196 TGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCT 42255 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || | ||| |||| || || ||||| || | |||||| || ||||| Sbjct 42256 GGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGAT 42315 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATG-GTCTTTTGAGGAATTTCCCAAATAG 76989 ||| || || | || || ||||| | | || ||| | ||| ||| ||||| | || Sbjct 42316 GAAGGCACCACGGTCCGCAGCCATCTGCACAACCTGTCGCT-GAGAAATCTCCCACACAG 42374 Query 76990 TTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCAT 77046 | ||| | | |||||||| | || | ||| | | || || || |||||||||| Sbjct 42375 TCTTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCAT 42434 Query 77047 CTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAA 77106 | | || || ||||| ||| |||| ||| | | | || | | | | | Sbjct 42435 CAGCAATGATACGGTTCTTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGA 42494 Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166 | || || || || | ||| || || |||| | |||| || ||| || || Sbjct 42495 GAAGCCAGGGGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGG 42554 Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226 ||| || || || | | || ||||| || | ||| || | ||| |||||| |||| Sbjct 42555 AGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCA 42614 Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATT 77286 |||| || || | | ||| || | || ||| || || ||| | ||| ||| ||| Sbjct 42615 TAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATT 42674 Query 77287 TCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTAC 77346 ||| ||||||||||| || || |||| ||| | ||| | || ||||| || | | Sbjct 42675 CCCACTCCCAAAGATCAGAGGGCTTGACATTCCACATATCAAACTGGAGAATGCCCTCAG 42734 Query 77347 TAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTT-CACAACTC 77405 ||| || || || | || || || || || | || || | |||| Sbjct 42735 AGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGA-- 42792 Query 77406 GCTTCCAATG-CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 77464 | | || | | ||| |||||| || ||||| || | ||| || || || | || || Sbjct 42793 GGTAGTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTC 42852 Query 77465 AATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAAT 77524 | ||||| || | | | || |||||||| || | || || || || | Sbjct 42853 GGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAG 42912 Query 77525 ACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAAT 77584 |||||| |||| || | | | ||| | ||| ||| ||| ||| || | || | Sbjct 42913 ACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGAC 42972 Query 77585 GTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAA 77644 ||| ||||| || || | || | ||||| |||| | || || | ||| || || Sbjct 42973 GTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAA 43032 Query 77645 ATCAAATCTTCCATCT--ATAAC-----AAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 || | | ||||| ||| ||| | | || || | || || || || | Sbjct 43033 GTCGTAGCAAGCATCTTCATAGTTGATGAAAGAAGG-CAGAGACAAGGAGGCAAGGTTGC 43091 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||| || ||||||| || | | || | || ||||| || || || || | | Sbjct 43092 AAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTC 43151 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATA 77816 ||| || || || || | |||||||||||| ||||| ||| ||||| || || || Sbjct 43152 GGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA-TCCTTGTAGAGCATG 43210 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 77876 || || | ||||| || |||| | |||| ||| | | ||| | | ||| || Sbjct 43211 AAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTG 43270 Query 77877 ATCATAGATTTGTATCGCCT---CTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATT 77931 || ||| ||| | | | |||||| || || || ||| | |||| ||||| | Sbjct 43271 AT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCC--TCAAACT 43325 Query 77932 CATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCAC 77991 |||| || | ||| | | |||||||| || || |||||||| | | ||| || | Sbjct 43326 CATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGC 43385 Query 77992 CATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 78051 | | | || || || ||||| ||||||||||| ||||| ||||| | || || || | Sbjct 43386 CGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCAC 43445 Query 78052 GGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAG 78111 | | | || || || || |||||| ||||| || ||||| | | || | Sbjct 43446 GAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGG 43505 Query 78112 AATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTA 78171 |||||||| || || || || || | | || ||||| || ||||| ||||| || | Sbjct 43506 CGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGA 43565 Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231 || | || ||||| || | || | || ||| |||| |||||||| || || |||| Sbjct 43566 CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCAT 43625 Query 78232 TTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT--ATCCCTATTCC 78289 | || || | || ||| ||| | || || ||| | || | || || || Sbjct 43626 TGGTACCGGCGATGTAAGAGCCAGTGGCACG--GATTCGGTGGGCATTCAAGCCAATACC 43683 Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACT 78349 || |||||||| || || | || ||| || | |||||||||||||| || || || Sbjct 43684 ACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCT 43743 Query 78350 GTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATT 78409 ||| ||| |||| | || ||| || || || | |||| | || || || || || Sbjct 43744 GTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTT 43803 Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 ||||| || || ||||| || || | || || | || ||||||||||| Sbjct 43804 GAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTTTC 43860 >seq221 Length=98460 Score = 113 bits (124), Expect = 6e-20 Identities = 360/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||| ||| |||||||| ||||| | | || | ||||| ||||| | ||| Sbjct 72321 CAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGA 72262 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || || || || |||||||| || || | || || | ||| ||||| Sbjct 72261 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAG 72202 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC---GTAACTGGCTTCGTTGTGT 48317 || || || || || ||||| || ||| | || | | || | | || || Sbjct 72201 ATACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTGG 72142 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || |||||||| |||||||| | ||||| || || || | || || Sbjct 72141 ATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTG 72082 Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437 ||||| | | | | || || | ||| || || || | || || || Sbjct 72081 AAGAGGTATGTGCGCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTT 72022 Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 |||||||| || || || || ||||| || || || || |||| || || | |||| Sbjct 72021 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATC 71962 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || ||||| | || || ||| | | ||||| || || || ||||| ||||| Sbjct 71961 TGGACCTCGCCGCTGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCG 71902 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 || || || | | || || || |||| |||| |||||||| || |||||| Sbjct 71901 AAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAG 71842 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | | ||| || || | ||| | || ||||||||||| || || |||||||| || Sbjct 71841 TCGTGAAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTC 71782 Query 48675 TTATACATATTCCATAT 48691 || ||||| | ||| || Sbjct 71781 TTGTACATTTGCCAGAT 71765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664623303840