Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq51 174 2e-38
seq221 113 6e-20
>seq51
Length=398837
Score = 174 bits (192), Expect = 2e-38
Identities = 1055/1677 (63%), Gaps = 33/1677 (2%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| || |||||||| || || || ||||| || |||| || ||| ||||||||
Sbjct 42196 TGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCT 42255
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| |||| || || ||||| || | |||||| || |||||
Sbjct 42256 GGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGAT 42315
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATG-GTCTTTTGAGGAATTTCCCAAATAG 76989
||| || || | || || ||||| | | || ||| | ||| ||| ||||| | ||
Sbjct 42316 GAAGGCACCACGGTCCGCAGCCATCTGCACAACCTGTCGCT-GAGAAATCTCCCACACAG 42374
Query 76990 TTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCAT 77046
| ||| | | |||||||| | || | ||| | | || || || ||||||||||
Sbjct 42375 TCTTGTACAGAGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCAT 42434
Query 77047 CTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAA 77106
| | || || ||||| ||| |||| ||| | | | || | | | | |
Sbjct 42435 CAGCAATGATACGGTTCTTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGA 42494
Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166
| || || || || | ||| || || |||| | |||| || ||| || ||
Sbjct 42495 GAAGCCAGGGGTTGACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGG 42554
Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226
||| || || || | | || ||||| || | ||| || | ||| |||||| ||||
Sbjct 42555 AGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCA 42614
Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATT 77286
|||| || || | | ||| || | || ||| || || ||| | ||| ||| |||
Sbjct 42615 TAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATT 42674
Query 77287 TCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTAC 77346
||| ||||||||||| || || |||| ||| | ||| | || ||||| || | |
Sbjct 42675 CCCACTCCCAAAGATCAGAGGGCTTGACATTCCACATATCAAACTGGAGAATGCCCTCAG 42734
Query 77347 TAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTT-CACAACTC 77405
||| || || || | || || || || || | || || | ||||
Sbjct 42735 AGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGA-- 42792
Query 77406 GCTTCCAATG-CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 77464
| | || | | ||| |||||| || ||||| || | ||| || || || | || ||
Sbjct 42793 GGTAGTAAGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTC 42852
Query 77465 AATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAAT 77524
| ||||| || | | | || |||||||| || | || || || || |
Sbjct 42853 GGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAG 42912
Query 77525 ACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAAT 77584
|||||| |||| || | | | ||| | ||| ||| ||| ||| || | || |
Sbjct 42913 ACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGAC 42972
Query 77585 GTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAA 77644
||| ||||| || || | || | ||||| |||| | || || | ||| || ||
Sbjct 42973 GTCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAA 43032
Query 77645 ATCAAATCTTCCATCT--ATAAC-----AAACATGTTCAAAGCTATAGATGCTAGATTAC 77697
|| | | ||||| ||| ||| | | || || | || || || || |
Sbjct 43033 GTCGTAGCAAGCATCTTCATAGTTGATGAAAGAAGG-CAGAGACAAGGAGGCAAGGTTGC 43091
Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757
|||| || ||||||| || | | || | || ||||| || || || || | |
Sbjct 43092 AAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTC 43151
Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATA 77816
||| || || || || | |||||||||||| ||||| ||| ||||| || || ||
Sbjct 43152 GGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA-TCCTTGTAGAGCATG 43210
Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 77876
|| || | ||||| || |||| | |||| ||| | | ||| | | ||| ||
Sbjct 43211 AAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTG 43270
Query 77877 ATCATAGATTTGTATCGCCT---CTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATT 77931
|| ||| ||| | | | |||||| || || || ||| | |||| ||||| |
Sbjct 43271 AT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCC--TCAAACT 43325
Query 77932 CATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCAC 77991
|||| || | ||| | | |||||||| || || |||||||| | | ||| || |
Sbjct 43326 CATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGC 43385
Query 77992 CATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 78051
| | | || || || ||||| ||||||||||| ||||| ||||| | || || || |
Sbjct 43386 CGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCAC 43445
Query 78052 GGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAG 78111
| | | || || || || |||||| ||||| || ||||| | | || |
Sbjct 43446 GAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGG 43505
Query 78112 AATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTA 78171
|||||||| || || || || || | | || ||||| || ||||| ||||| || |
Sbjct 43506 CGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGA 43565
Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231
|| | || ||||| || | || | || ||| |||| |||||||| || || ||||
Sbjct 43566 CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCAT 43625
Query 78232 TTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT--ATCCCTATTCC 78289
| || || | || ||| ||| | || || ||| | || | || || ||
Sbjct 43626 TGGTACCGGCGATGTAAGAGCCAGTGGCACG--GATTCGGTGGGCATTCAAGCCAATACC 43683
Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACT 78349
|| |||||||| || || | || ||| || | |||||||||||||| || || ||
Sbjct 43684 ACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATCAATGCT 43743
Query 78350 GTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATT 78409
||| ||| |||| | || ||| || || || | |||| | || || || || ||
Sbjct 43744 GTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTT 43803
Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466
||||| || || ||||| || || | || || | || |||||||||||
Sbjct 43804 GAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTTTC 43860
>seq221
Length=98460
Score = 113 bits (124), Expect = 6e-20
Identities = 360/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
|| ||||| ||| |||||||| ||||| | | || | ||||| ||||| | |||
Sbjct 72321 CAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGA 72262
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || || || || |||||||| || || | || || | ||| |||||
Sbjct 72261 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAG 72202
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC---GTAACTGGCTTCGTTGTGT 48317
|| || || || || ||||| || ||| | || | | || | | || ||
Sbjct 72201 ATACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTGG 72142
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
||||| || |||||||| |||||||| | ||||| || || || | || ||
Sbjct 72141 ATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTG 72082
Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437
||||| | | | | || || | ||| || || || | || || ||
Sbjct 72081 AAGAGGTATGTGCGCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTT 72022
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
|||||||| || || || || ||||| || || || || |||| || || | ||||
Sbjct 72021 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATC 71962
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| ||||| | || || ||| | | ||||| || || || ||||| |||||
Sbjct 71961 TGGACCTCGCCGCTGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCG 71902
Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614
|| || || | | || || || |||| |||| |||||||| || ||||||
Sbjct 71901 AAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAG 71842
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
|| | | ||| || || | ||| | || ||||||||||| || || |||||||| ||
Sbjct 71841 TCGTGAAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTC 71782
Query 48675 TTATACATATTCCATAT 48691
|| ||||| | ||| ||
Sbjct 71781 TTGTACATTTGCCAGAT 71765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694664623303840
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