Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq51 181 2e-40
>seq51
Length=398837
Score = 181 bits (200), Expect = 2e-40
Identities = 1114/1778 (63%), Gaps = 39/1778 (2%)
Strand=Plus/Plus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| ||||| | || || | | |||||| || |||||||| || || || |||
Sbjct 42167 GTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGA 42226
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| || |||| || ||| |||||||| || | ||| | || || ||
Sbjct 42227 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATG 42286
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
||||| || | |||||| || |||||||| || || | || || ||||| | | |
Sbjct 42287 TGAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCACA 42346
Query 75557 ATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 75615
| ||| | ||| ||| ||||| | ||| ||| | | |||||||| | || |
Sbjct 42347 ACCTGTCGCT-GAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGAT 42405
Query 75616 ATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATT 75672
|| | | || || || || || ||||||| || || ||||| || ||||
Sbjct 42406 GTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGGA 42465
Query 75673 CCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732
||| | | ||| | | | | || || || || |||| ||| || || ||
Sbjct 42466 CCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCC 42525
Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792
|| | |||| || ||| || || ||| || || || | | || ||||| ||
Sbjct 42526 AGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCC 42585
Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852
| ||| || | || |||||| |||||||| || || | | ||| || | || |||
Sbjct 42586 AAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACC 42645
Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912
|| || ||| | ||| ||| ||| ||| ||||||||||| || || ||||
Sbjct 42646 GTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAGGGCTTGACATT 42705
Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972
||| | ||| | || ||||| || | ||| || || || | || ||| |
Sbjct 42706 CCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGG 42765
Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACG-CACCGTAATAAATTGTTTCGA 76031
|| |||| | || || | ||| | ||| | || ||| |||||| || ||||
Sbjct 42766 ACCCTCCTCCTTGGCGAGCT-GCACAGAGGTAGTAAGGGCAGCGTGATAAATAGTCTCGA 42824
Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAA 76091
| || | ||| || || || | || || || ||||| || | | | || |
Sbjct 42825 AGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGA 42884
Query 76092 ATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 76151
| ||||| || || || || || || | |||||| |||| || | | | ||| |
Sbjct 42885 AGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTTGCTGTTGC 42944
Query 76152 CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTA 76211
||| ||| ||| |||||| | || | || ||||| || || | || | |||||| |
Sbjct 42945 GAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACAACGA 43004
Query 76212 CTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACA-------AAC 76264
||| | || || | ||| || || || | ||||| ||| | ||
Sbjct 43005 CTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTAGCAAGCATCT-TCATAGTTGATGAAA 43063
Query 76265 ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGT 76324
| |||| | || || || || |||||||| ||||||| || | || |
Sbjct 43064 GAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCA 43123
Query 76325 ATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTT 76384
|| ||||| ||||| || || | ||| || ||||| || | ||||||||||||
Sbjct 43124 ATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTG 43183
Query 76385 TTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGAT 76443
||| || ||| ||||| || || | || || |||| || || |||| | ||||
Sbjct 43184 CGGTTGCAGTGA-TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAG 43242
Query 76444 AATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTC 76500
||| | | ||| | | ||| || || ||| ||| | ||| |||||| ||
Sbjct 43243 AATGGCGTACCAAAGTTTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTC 43299
Query 76501 ATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558
|| | | ||| | | || ||||| ||||| || | ||| | | |||||| ||
Sbjct 43300 GTACTTTTCGTACAGAGCC--TCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 43357
Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618
|| || || ||||| | | ||| || || | | || || || ||||| |||||||||
Sbjct 43358 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 43417
Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678
|| ||||| ||||| | || || || || | | || || || || ||||||
Sbjct 43418 GGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 43477
Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738
||||| |||||||| | | || | |||||||| || || || || || | ||
Sbjct 43478 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCA 43537
Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798
|| ||||| || ||||| ||||| || | || | |||||||| || | || | || |
Sbjct 43538 CCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGC 43597
Query 76799 ATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGA 76858
|| |||| || ||||| || |||||||| || || | || ||| ||| |||||
Sbjct 43598 ATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGG 43657
Query 76859 ATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTC 76918
|| | | ||| || || || ||||| || || || | ||||| ||
Sbjct 43658 ATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTG 43717
Query 76919 AATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC 76978
| || || ||||| || || || || || ||| |||| | || ||| || || ||
Sbjct 43718 AGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAT 43777
Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038
| |||| | || || || || || || || || || ||||||||||| | ||
Sbjct 43778 AGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTG 43837
Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT------CCCATTGATGAATT 77092
|| | || ||||||||||| | || || |||| |||| ||
Sbjct 43838 CTTGACATGAGGTTGTATGTTTCCAAGACACGCTCAATATTGTCACCCCA------GATA 43891
Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130
|| |||||||| ||||| | ||||||||| || || ||
Sbjct 43892 CCGACAGCGACTCGCATGATCATATGCTGCGGGCGCTC 43929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712930113481920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |