Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq51 181 2e-40 >seq51 Length=398837 Score = 181 bits (200), Expect = 2e-40 Identities = 1114/1778 (63%), Gaps = 39/1778 (2%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||| ||||| | || || | | |||||| || |||||||| || || || ||| Sbjct 42167 GTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGA 42226 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| || ||| |||||||| || | ||| | || || || Sbjct 42227 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATG 42286 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | |||||| || |||||||| || || | || || ||||| | | | Sbjct 42287 TGAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCACA 42346 Query 75557 ATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 75615 | ||| | ||| ||| ||||| | ||| ||| | | |||||||| | || | Sbjct 42347 ACCTGTCGCT-GAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGAT 42405 Query 75616 ATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATT 75672 || | | || || || || || ||||||| || || ||||| || |||| Sbjct 42406 GTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGGA 42465 Query 75673 CCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 ||| | | ||| | | | | || || || || |||| ||| || || || Sbjct 42466 CCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCC 42525 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 || | |||| || ||| || || ||| || || || | | || ||||| || Sbjct 42526 AGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCC 42585 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 | ||| || | || |||||| |||||||| || || | | ||| || | || ||| Sbjct 42586 AAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACC 42645 Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 || || ||| | ||| ||| ||| ||| ||||||||||| || || |||| Sbjct 42646 GTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAGGGCTTGACATT 42705 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 ||| | ||| | || ||||| || | ||| || || || | || ||| | Sbjct 42706 CCACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGG 42765 Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACG-CACCGTAATAAATTGTTTCGA 76031 || |||| | || || | ||| | ||| | || ||| |||||| || |||| Sbjct 42766 ACCCTCCTCCTTGGCGAGCT-GCACAGAGGTAGTAAGGGCAGCGTGATAAATAGTCTCGA 42824 Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAA 76091 | || | ||| || || || | || || || ||||| || | | | || | Sbjct 42825 AGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGA 42884 Query 76092 ATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 76151 | ||||| || || || || || || | |||||| |||| || | | | ||| | Sbjct 42885 AGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCGGTGACGCATGTTGCTGTTGC 42944 Query 76152 CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTA 76211 ||| ||| ||| |||||| | || | || ||||| || || | || | |||||| | Sbjct 42945 GAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACAACGA 43004 Query 76212 CTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACA-------AAC 76264 ||| | || || | ||| || || || | ||||| ||| | || Sbjct 43005 CTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGTAGCAAGCATCT-TCATAGTTGATGAAA 43063 Query 76265 ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGT 76324 | |||| | || || || || |||||||| ||||||| || | || | Sbjct 43064 GAAGGCAGAGACAAGGAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCA 43123 Query 76325 ATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTT 76384 || ||||| ||||| || || | ||| || ||||| || | |||||||||||| Sbjct 43124 ATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTG 43183 Query 76385 TTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGAT 76443 ||| || ||| ||||| || || | || || |||| || || |||| | |||| Sbjct 43184 CGGTTGCAGTGA-TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAG 43242 Query 76444 AATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTC 76500 ||| | | ||| | | ||| || || ||| ||| | ||| |||||| || Sbjct 43243 AATGGCGTACCAAAGTTTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTC 43299 Query 76501 ATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 || | | ||| | | || ||||| ||||| || | ||| | | |||||| || Sbjct 43300 GTACTTTTCGTACAGAGCC--TCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 43357 Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 || || || ||||| | | ||| || || | | || || || ||||| ||||||||| Sbjct 43358 TCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 43417 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 || ||||| ||||| | || || || || | | || || || || |||||| Sbjct 43418 GGGATCCAAAGAGCGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 43477 Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738 ||||| |||||||| | | || | |||||||| || || || || || | || Sbjct 43478 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCA 43537 Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798 || ||||| || ||||| ||||| || | || | |||||||| || | || | || | Sbjct 43538 CCGGGTCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGC 43597 Query 76799 ATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGA 76858 || |||| || ||||| || |||||||| || || | || ||| ||| ||||| Sbjct 43598 ATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGG 43657 Query 76859 ATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTC 76918 || | | ||| || || || ||||| || || || | ||||| || Sbjct 43658 ATTCGGTGGGCATTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTG 43717 Query 76919 AATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC 76978 | || || ||||| || || || || || ||| |||| | || ||| || || || Sbjct 43718 AGAGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAT 43777 Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 | |||| | || || || || || || || || || ||||||||||| | || Sbjct 43778 AGTTGAGGCTGTGGGGTACCGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTG 43837 Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT------CCCATTGATGAATT 77092 || | || ||||||||||| | || || |||| |||| || Sbjct 43838 CTTGACATGAGGTTGTATGTTTCCAAGACACGCTCAATATTGTCACCCCA------GATA 43891 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || |||||||| ||||| | ||||||||| || || || Sbjct 43892 CCGACAGCGACTCGCATGATCATATGCTGCGGGCGCTC 43929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930113481920