Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq47 87.8 2e-12
>seq47
Length=1426776
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887
|| ||||||||| || || || ||| |||||||||| || || ||| |||| || || ||
Sbjct 446744 CACCATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTC 446803
Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947
||||| | | || | ||| ||| || ||| | || || ||| | || ||
Sbjct 446804 TTCCGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGA 446863
Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007
|||||||||||| || | || ||||| || || || || | ||| | |||||
Sbjct 446864 CCAGCAACGTTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTA 446923
Query 25008 CAGCATACAGAAAGAGGCCACGCTTCAT 25035
|| ||| ||||| ||| |||| ||||||
Sbjct 446924 CAACATTCAGAAGGAGTCCACTCTTCAT 446951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418302791755040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |