Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 271 7e-68 seq43 140 3e-28 seq47 123 2e-23 seq34 113 4e-20 >seq14 Length=298472 Score = 271 bits (300), Expect = 7e-68 Identities = 634/954 (66%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| ||||| |||||||| || |||||| | |||||| || || Sbjct 73558 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 73499 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 |||||| | || || || | || | ||||| || || || ||||| | |||| Sbjct 73498 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCC 73439 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 73438 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 73379 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | |||| || ||| ||| | | ||||||||||| ||||| || Sbjct 73378 TTCTGAGCCTTGAT-CGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 73320 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || | ||||| |||||||| ||||| || | | | || ||||| || | Sbjct 73319 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 73260 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || || ||||| || |||| |||||||| || ||||| || || ||| Sbjct 73259 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 73200 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || |||||||| || ||| |||||| | ||| | || || || Sbjct 73199 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 73140 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || | ||||| ||||||||||| | |||||| || || |||| ||| ||||| || Sbjct 73139 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 73080 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || || || ||||||||| | || | ||||| || |||| |||||| || Sbjct 73079 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 73020 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || || | ||| || | | ||| Sbjct 73019 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 72960 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || ||||| |||||||| ||||| Sbjct 72959 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 72900 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||||| || || | | |||||||| || || |||| ||| | | || || | Sbjct 72899 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 72840 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| || ||||| ||| | | ||||| || ||||| || Sbjct 72839 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGT 72780 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || ||||| | | || ||||| ||||||| Sbjct 72779 CTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGTG 72720 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || | |||||| | |||| ||| |||| || ||||| || | || || || Sbjct 72719 CTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 72660 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||||| || | || | || || || || | || ||||| || | ||| Sbjct 72659 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 72606 >seq43 Length=937570 Score = 140 bits (154), Expect = 3e-28 Identities = 555/862 (64%), Gaps = 31/862 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | ||||| Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTA--TTAA 57685 || |||||||| ||| ||| | || | || | | || ||| | || | | Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCCGATGAGCAGTTCTTCGTCTC 868031 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 ||| | | || || ||||| || || ||||||||||| |||||||| | ||||| | Sbjct 868030 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 867971 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| || || || | | ||||| | || || ||||| || || | || Sbjct 867970 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 867911 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || || | || || || |||||||| || || | ||||| || Sbjct 867910 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGC 867851 Query 57866 CGAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | || ||| || || |||||||| || || || || ||| ||| |||||||| | Sbjct 867850 CCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTG 867792 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTC---GCCGAGAGGCTAATCG 57981 | ||| | ||| |||||| || | | || | | | | ||| | | || | | Sbjct 867791 ACTGGGCCATCCGATGGATCCAA---GATAAGGACTCTTCCTTTGCCCAACGTCTCGTTG 867735 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 | ||||| || || || ||||| ||||| || ||| || | || || ||| | | Sbjct 867734 CTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCA 867675 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || || || ||||| || ||||| || |||||| | || || || ||||||| Sbjct 867674 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 867615 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161 |||| || ||||| ||||| ||||| | |||||||| |||| | || | Sbjct 867614 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCAC-------CTAAAGGGCCGTGCC 867562 Query 58162 ATC--GC-----ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | | || || || || ||||| || || ||| | || ||| | ||||| || Sbjct 867561 AGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTC 867502 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || ||| | ||||| |||||| ||| | ||| |||||||| Sbjct 867501 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 867442 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || || || | || | ||| || | |||| ||| ||||| | | Sbjct 867441 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCA 867384 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 867383 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 867324 Query 58393 aaaaaGTTAGCGAATATCAAAA 58414 | ||| ||| || ||||| Sbjct 867323 AGCGTGTTGCCGACTACCAAAA 867302 >seq47 Length=1426776 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| |||| ||||| | || Sbjct 446747 CATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 446806 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| ||| | || |||||||| Sbjct 446807 CGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 446866 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||| | || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 446867 GCAACGTTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 446926 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||||||||| || || Sbjct 446927 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 446959 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || |||||| | || ||||| | Sbjct 447486 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 447545 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || ||| ||||| ||| | || || || ||| Sbjct 447546 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAG 447605 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||||||||||| | || ||||||| |||||| Sbjct 447606 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAAC 447665 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || || || ||||| || || || || |||| Sbjct 447666 ATCCAGAAGGAGTCAACTCTCCACCTCGTTCTCCGACT 447703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || ||||| | || || || ||||||| | ||| Sbjct 447040 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACCATCG 447099 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || ||||||||||| || | Sbjct 447100 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGCCTGA 447159 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || ||||| || || |||||||| | || | ||| || ||||| || || | Sbjct 447160 TTTTTGCTGGAAAGCAACTGGAAGACGGTCGAACCCTTGCCGACTACAACATCCAGAAGG 447219 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| || |||||||| || || Sbjct 447220 AATCTACCCTTCATCTCGTCCT 447241 >seq34 Length=1002739 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || ||||| || ||||||||| | || || || | Sbjct 517203 AAGATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 517144 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 517143 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 517084 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || |||||||| ||| | || || || ||||||| || Sbjct 517083 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 517024 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || ||||| || Sbjct 517023 AACATCCAGAAGGAGTCCACTCTCCACCTGGTCCT 516989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765079417040