Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq14 271 7e-68
seq43 140 3e-28
seq47 123 2e-23
seq34 113 4e-20
>seq14
Length=298472
Score = 271 bits (300), Expect = 7e-68
Identities = 634/954 (66%), Gaps = 2/954 (0%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| ||||| |||||||| || |||||| | |||||| || ||
Sbjct 73558 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 73499
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|||||| | || || || | || | ||||| || || || ||||| | ||||
Sbjct 73498 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCC 73439
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||| | || || ||| |
Sbjct 73438 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 73379
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | | |||| || ||| ||| | | ||||||||||| ||||| ||
Sbjct 73378 TTCTGAGCCTTGAT-CGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 73320
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
|| || || | ||||| |||||||| ||||| || | | | || ||||| || |
Sbjct 73319 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 73260
Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
||| || || ||||| || |||| |||||||| || ||||| || || |||
Sbjct 73259 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 73200
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
|| || ||||| || |||||||| || ||| |||||| | ||| | || || ||
Sbjct 73199 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 73140
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
|| || | ||||| ||||||||||| | |||||| || || |||| ||| ||||| ||
Sbjct 73139 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 73080
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
||| ||||| || || || ||||||||| | || | ||||| || |||| |||||| ||
Sbjct 73079 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 73020
Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625
| ||| || || | || || | || || | ||| || | | |||
Sbjct 73019 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 72960
Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685
|| || || || || || ||||| || || || ||||| |||||||| |||||
Sbjct 72959 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 72900
Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745
|| ||||| || || | | |||||||| || || |||| ||| | | || || |
Sbjct 72899 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 72840
Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805
||| ||| || || ||| || ||||| ||| | | ||||| || ||||| ||
Sbjct 72839 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGT 72780
Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865
|| | | | || || || || || ||||| | | || ||||| |||||||
Sbjct 72779 CTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGTG 72720
Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925
|| || | |||||| | |||| ||| |||| || ||||| || | || || ||
Sbjct 72719 CTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 72660
Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|| ||||| || | || | || || || || | || ||||| || | |||
Sbjct 72659 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 72606
>seq43
Length=937570
Score = 140 bits (154), Expect = 3e-28
Identities = 555/862 (64%), Gaps = 31/862 (4%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|||||| | |||||||| ||||| || || || || ||||| | || || | |||||
Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTA--TTAA 57685
|| |||||||| ||| ||| | || | || | | || ||| | || | |
Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCCGATGAGCAGTTCTTCGTCTC 868031
Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745
||| | | || || ||||| || || ||||||||||| |||||||| | ||||| |
Sbjct 868030 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 867971
Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805
||| || || || | | ||||| | || || ||||| || || | ||
Sbjct 867970 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 867911
Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865
|| ||| | || || || | || || || |||||||| || || | ||||| ||
Sbjct 867910 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGC 867851
Query 57866 CGAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924
| || ||| || || |||||||| || || || || ||| ||| |||||||| |
Sbjct 867850 CCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTG 867792
Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTC---GCCGAGAGGCTAATCG 57981
| ||| | ||| |||||| || | | || | | | | ||| | | || | |
Sbjct 867791 ACTGGGCCATCCGATGGATCCAA---GATAAGGACTCTTCCTTTGCCCAACGTCTCGTTG 867735
Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041
| ||||| || || || ||||| ||||| || ||| || | || || ||| | |
Sbjct 867734 CTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCA 867675
Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101
|||| || || || ||||| || ||||| || |||||| | || || || |||||||
Sbjct 867674 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 867615
Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161
|||| || ||||| ||||| ||||| | |||||||| |||| | || |
Sbjct 867614 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCAC-------CTAAAGGGCCGTGCC 867562
Query 58162 ATC--GC-----ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
| | || || || || ||||| || || ||| | || ||| | ||||| ||
Sbjct 867561 AGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTC 867502
Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274
|| || || || || ||| | ||||| |||||| ||| | ||| ||||||||
Sbjct 867501 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 867442
Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332
||||| || || || | || | ||| || | |||| ||| ||||| | |
Sbjct 867441 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCA 867384
Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392
|| || || || || ||| | ||||| || | |||||||| ||||| ||||| |
Sbjct 867383 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 867324
Query 58393 aaaaaGTTAGCGAATATCAAAA 58414
| ||| ||| || |||||
Sbjct 867323 AGCGTGTTGCCGACTACCAAAA 867302
>seq47
Length=1426776
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| |||| ||||| | ||
Sbjct 446747 CATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 446806
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | |||| | ||||| | || ||||||||| ||| | || ||||||||
Sbjct 446807 CGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 446866
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| ||| | || ||||| ||||| ||| | || ||| ||| | ||||| ||
Sbjct 446867 GCAACGTTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 446926
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||| || || || ||||||||||| || ||
Sbjct 446927 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 446959
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || || || || |||||| | || ||||| |
Sbjct 447486 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 447545
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || | || ||| ||||| ||| | || || || |||
Sbjct 447546 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAG 447605
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||||||||||| | || ||||||| ||||||
Sbjct 447606 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAAC 447665
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| || || || || ||||| || || || || ||||
Sbjct 447666 ATCCAGAAGGAGTCAACTCTCCACCTCGTTCTCCGACT 447703
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || ||||| || ||||| | || || || ||||||| | |||
Sbjct 447040 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACCATCG 447099
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || || || ||||||||| || | || || ||||||||||| || |
Sbjct 447100 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGCCTGA 447159
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| || ||||| || || |||||||| | || | ||| || ||||| || || |
Sbjct 447160 TTTTTGCTGGAAAGCAACTGGAAGACGGTCGAACCCTTGCCGACTACAACATCCAGAAGG 447219
Query 31383 AATCGACTCTTCATCTGGTACT 31404
|||| || |||||||| || ||
Sbjct 447220 AATCTACCCTTCATCTCGTCCT 447241
>seq34
Length=1002739
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || ||||| || ||||||||| | || || || |
Sbjct 517203 AAGATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 517144
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 517143 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 517084
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || || |||||||| ||| | || || || ||||||| ||
Sbjct 517083 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 517024
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || ||||| || ||||| ||
Sbjct 517023 AACATCCAGAAGGAGTCCACTCTCCACCTGGTCCT 516989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765079417040
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