Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq43 226 4e-54
seq14 141 1e-28
>seq43
Length=937570
Score = 226 bits (250), Expect = 4e-54
Identities = 565/845 (67%), Gaps = 25/845 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | || ||
Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || |||||| ||||| || | ||
Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 868030
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||||| | || ||||| || | ||| ||||| || |||||||| || || || || ||
Sbjct 868029 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 867971
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256
|||| | ||| | || || |||| |||| ||| ||||| ||||| |||||||
Sbjct 867970 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGTTTCTACGGCTTCCAGATCATGA 867912
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315
| |||||| | ||||| || | ||||| || || |||| || || || || |
Sbjct 867911 TGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCG 867852
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
| | ||| | || || ||||| || || || | || | || || || ||||||
Sbjct 867851 CCCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCT 867793
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || || |||||| | || | | ||||| | ||| | | || || ||
Sbjct 867792 GACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCT 867733
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| ||| || || | || || |||||||||
Sbjct 867732 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAG 867673
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||||| || ||||| | ||||||| | || ||||| ||||||||
Sbjct 867672 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 867613
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615
|| ||| |||||||||| || || | ||| | | | || || | ||
Sbjct 867612 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTAAAGGGCCGTGCC 867562
Query 125616 AGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
||| | | | | | ||| | || | || |||||||| | || ||||| ||||| |
Sbjct 867561 AGCAAGCAGATGAT--TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 867504
Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733
| || || | || || | | | |||||||||| | || ||| ||||||
Sbjct 867503 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 867444
Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACG 125790
| ||||| || || |||||||| || || ||||| || ||| | ||||| |
Sbjct 867443 TTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAACGAGAAGGTCTACAAGG 867387
Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850
||| || ||||| || |||||| | ||| || || | || ||||||||||| ||||
Sbjct 867386 CCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCG 867327
Query 125851 AGAAG 125855
|||||
Sbjct 867326 AGAAG 867322
>seq14
Length=298472
Score = 141 bits (156), Expect = 1e-28
Identities = 307/450 (68%), Gaps = 12/450 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | ||
Sbjct 73077 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGAT 73136
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || |||| || ||| | |||
Sbjct 73137 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAC 73196
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052
| || ||| || ||| | || ||| | ||||||||||| || || ||||||
Sbjct 73197 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTG-- 73254
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || ||||||||| | || || || || |||| |||| || || |||
Sbjct 73255 -ACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 73313
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171
|| ||||| |||| |||||| | | |||| | || |||||| || | ||
Sbjct 73314 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGA-TCAAGGC 73372
Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
| |||| || ||| | |||| || ||| ||| ||| ||||| |||| || | |||
Sbjct 73373 TC-AGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATG 73430
Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289
|||||||||||| || || ||||| || |||||| || | || |||||| ||
Sbjct 73431 CTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCATCCGAAGC 73490
Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
|||||||| ||||| |||||| | ||||||
Sbjct 73491 TCCAATCTTTGCACTGAAATTATCGAGTAC 73520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057004612120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |