Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq43 226 4e-54 seq14 141 1e-28 >seq43 Length=937570 Score = 226 bits (250), Expect = 4e-54 Identities = 565/845 (67%), Gaps = 25/845 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | || || Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || |||||| ||||| || | || Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 868030 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || ||||| || | ||| ||||| || |||||||| || || || || || Sbjct 868029 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 867971 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256 |||| | ||| | || || |||| |||| ||| ||||| ||||| ||||||| Sbjct 867970 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGTTTCTACGGCTTCCAGATCATGA 867912 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| || || |||| || || || || | Sbjct 867911 TGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCG 867852 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | | ||| | || || ||||| || || || | || | || || || |||||| Sbjct 867851 CCCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCT 867793 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || || |||||| | || | | ||||| | ||| | | || || || Sbjct 867792 GACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCT 867733 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| || || ||||| |||||||| ||| || || | || || ||||||||| Sbjct 867732 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAG 867673 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||||| || ||||| | ||||||| | || ||||| |||||||| Sbjct 867672 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 867613 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 || ||| |||||||||| || || | ||| | | | || || | || Sbjct 867612 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTAAAGGGCCGTGCC 867562 Query 125616 AGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||| | | | | | ||| | || | || |||||||| | || ||||| ||||| | Sbjct 867561 AGCAAGCAGATGAT--TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 867504 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | | | |||||||||| | || ||| |||||| Sbjct 867503 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 867444 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACG 125790 | ||||| || || |||||||| || || ||||| || ||| | ||||| | Sbjct 867443 TTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAACGAGAAGGTCTACAAGG 867387 Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850 ||| || ||||| || |||||| | ||| || || | || ||||||||||| |||| Sbjct 867386 CCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCG 867327 Query 125851 AGAAG 125855 ||||| Sbjct 867326 AGAAG 867322 >seq14 Length=298472 Score = 141 bits (156), Expect = 1e-28 Identities = 307/450 (68%), Gaps = 12/450 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 73077 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGAT 73136 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | ||| Sbjct 73137 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAC 73196 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 | || ||| || ||| | || ||| | ||||||||||| || || |||||| Sbjct 73197 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTG-- 73254 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || ||||||||| | || || || || |||| |||| || || ||| Sbjct 73255 -ACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 73313 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171 || ||||| |||| |||||| | | |||| | || |||||| || | || Sbjct 73314 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGA-TCAAGGC 73372 Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | |||| || ||| ||| ||| ||||| |||| || | ||| Sbjct 73373 TC-AGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATG 73430 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| || || ||||| || |||||| || | || |||||| || Sbjct 73431 CTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCATCCGAAGC 73490 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||||||| ||||| |||||| | |||||| Sbjct 73491 TCCAATCTTTGCACTGAAATTATCGAGTAC 73520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057004612120