Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq47 114 1e-20
>seq47
Length=1426776
Score = 114 bits (126), Expect = 1e-20
Identities = 170/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581
|||||| ||| |||||| |||||||||||||||| | | || || ||||||| ||||
Sbjct 446951 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCT 446893
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
|||| ||| || |||| ||||| ||||| || || | | ||||||||| ||| |
Sbjct 446892 GCTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCT 446833
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
| ||||| | | || || |||| |||||| ||||| || ||||| || ||||
Sbjct 446832 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 446773
Query 48702 TGAGAGTTTTCACAAAAATCTGCATCGTGTC-TTGATC-GAAGAAAGAGTGATGTG 48755
| || || || || || |||||||| ||| | ||||| | | | |||||||||
Sbjct 446772 TTAGGGTCTTGACGAAGATCTGCATGGTGGCGGTGATCTGTCGCGAAAGTGATGTG 446717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249983242237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |