Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq43 118 1e-21 >seq43 Length=937570 Score = 118 bits (130), Expect = 1e-21 Identities = 540/850 (64%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || | ||||| || ||||| || || || || || | | || || ||| Sbjct 867302 TTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTT 867361 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGA-AAT 33131 |||||||| || || || ||||| | || || | || | | |||| || || Sbjct 867362 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGT-TGCCAAGAGCGACAAG 867420 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 | | ||| |||||||| || || || ||||| | ||| | ||||| || | ||| Sbjct 867421 GAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAG 867480 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | ||||||||| |||| || || || |||||||||| || ||||| || || || Sbjct 867481 GGCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGAT 867540 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | | || | | | || | | | || || | | || || || Sbjct 867541 ATCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGGCAGGCAAA 867600 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 || ||| ||||||||||| | | || || ||||| || || || || || ||||| Sbjct 867601 GTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCAT 867660 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || |||||||| || ||||| || || || ||||| | ||| |||||||| || || Sbjct 867661 GAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTC 867720 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGTATCCA-CT 33487 || ||||| || |||| || | | || || | | | || || ||||| | Sbjct 867721 AACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCATCG 867780 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 || ||||| || ||||||||| | || || || || || ||||| || || || | Sbjct 867781 GATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGT 867839 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 || || | || || | ||| || ||||| | || || | || || | Sbjct 867840 AGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGT 867899 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 ||||||| || || ||||| || ||||||||||| | |||||||| ||||| || | Sbjct 867900 GAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACCT 867959 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | || ||||| || | | || || || || || || ||| ||| || || || | Sbjct 867960 CGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAG 868019 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGA 33784 | | | || | || | | || || | || | | || ||||| || | || Sbjct 868020 CAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCGTGGA 868079 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 ||| || || | || | || || | ||||| || || ||||| ||||| || |||| Sbjct 868080 GATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTACA 868139 Query 33845 TGTTCCAGAT 33854 | | ||| || Sbjct 868140 TTTGCCAAAT 868149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945354518920