Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq47 89.7 4e-13
seq41 86.0 5e-12
>seq47
Length=1426776
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | |||||||| | ||||| | ||||||||| | |
Sbjct 447258 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 447317
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | || || ||||| ||||| || || || || || ||||||
Sbjct 447318 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 447377
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| |||| || | | ||||||||||| || |||| | ||| | ||| || |||
Sbjct 447378 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 447437
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || ||||||||
Sbjct 447438 ATTCAGAAGGAATCTAC 447454
>seq41
Length=801936
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| || ||||||||||| | ||||| ||||| |||
Sbjct 757896 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 757837
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || || || |||||| ||||||| | || || ||||||||||| |||
Sbjct 757836 AAGGAGGGCATTCCCCCGGACCAACAGCGACTGATCTTCGCTGGTAAGCAACTCGAGGAT 757777
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | ||| || ||| || ||||| || ||
Sbjct 757776 GGCCGAACTCTCTCCGACTACAACATCCAGAA 757745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429934758156735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |