Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq34 93.3 3e-14
seq47 86.0 5e-12
>seq34
Length=1002739
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || |||||||||||| || ||| | | |||
Sbjct 516989 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 517048
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| ||| | || || ||||| ||||| || | |||||| |||||
Sbjct 517049 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 517108
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | ||| || | | | | |||||| | |||| || | |||||| ||
Sbjct 517109 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 517168
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || || || || ||||| ||||||||||| |||
Sbjct 517169 TTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTTG 517204
>seq47
Length=1426776
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||| |||||| || ||| | || ||||| ||
Sbjct 447688 TGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGC 447629
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851
|| || || | ||||| ||||| || || || | |||||| || || ||| |||
Sbjct 447628 TTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTG 447569
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
|| |||||| | | | | |||||| | | ||| || | ||||||||| ||||| ||
Sbjct 447568 CT-CTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGT 447510
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || |||||||||||
Sbjct 447509 GAGAGTCTTCACGAAAATCTGCAT 447486
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || || ||||| || ||||||||||||| | ||| | | |||
Sbjct 447469 AGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCC 447410
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842
|| | ||| ||||| ||| | || || |||||||| ||| || | ||||| |||| |
Sbjct 447409 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCC 447350
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
| | ||||| |||||| | | | || ||| | ||| ||||| || |||||
Sbjct 447349 TGGATCTTGCT-CTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGT 447291
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || || ||||| || || |||||
Sbjct 447290 CTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 447258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086829928630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |