Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq47 102 7e-17 >seq47 Length=1426776 Score = 102 bits (112), Expect = 7e-17 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| | ||||| || ||||||| |||| || ||||| Sbjct 446745 ACCATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCT 446804 Query 25056 TCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 || ||||||||||| || || ||| | || | ||| ||||| || || || || || Sbjct 446805 TCCGACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCCCCC 446861 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 ||||| || || | ||||| |||||||| || | || || | |||||| | ||| Sbjct 446862 GACCAGCAACGTTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGAT 446921 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| || || ||||| || ||| | || || Sbjct 446922 TACAACATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 446959 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || || ||||| | Sbjct 447486 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 447545 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || || || || || || ||||| ||||| || Sbjct 447546 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAG 447605 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || || ||||||| |||||| || |||| || || Sbjct 447606 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAAC 447665 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 447666 ATCCAGAAGGAGTCAACTCTCCA 447688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326748359155