Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq43 122 2e-22 seq13 107 4e-18 seq21 93.3 9e-14 seq14 93.3 9e-14 >seq43 Length=937570 Score = 122 bits (134), Expect = 2e-22 Identities = 270/403 (67%), Gaps = 8/403 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||||||||||| ||| Sbjct 867326 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTG 867385 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | |||||| || || | || || || || || ||||| | Sbjct 867386 GCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAGGAGACGATCAGCGACGAACTCAATG 867445 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || |||||||||||||| | | ||| |||| |||||| || | Sbjct 867446 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGG 867505 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| ||| ||| || || || | || | | ||| ||| | | | | Sbjct 867506 AACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTGAATCATCTGCTTGCTGGCA 867565 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | || || || | |||| ||||| | |||| | ||| ||||||||||| Sbjct 867566 CGGC----CCTTTAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTC 867621 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| |||||| || | ||| |||||||| | ||||| ||| ||||||| Sbjct 867622 ACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 867681 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||| || | | |||| ||| ||| | | |||||| ||| Sbjct 867682 GAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACA 867724 >seq13 Length=1542651 Score = 107 bits (118), Expect = 4e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 1227674 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 1227733 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| |||||||||| | || |||||||| ||||||||| || | Sbjct 1227734 CAGACTCATCTCCGTCTCAAGCGTGGTCAGCGTTATGGTCTTTGCGGTCCCAACGGTTCC 1227793 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | || || || ||||| ||| Sbjct 1227794 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 1227852 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| || | || ||||||||| | |||||| Sbjct 1227853 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCC 1227895 Score = 102 bits (112), Expect = 2e-16 Identities = 168/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211 ||| || ||| || |||| ||||| || ||||| ||||| || |||||||| || ||| Sbjct 1228481 TCTCTGGGCTCCCGTATTGCCGTCATCGGCCCCAACGGTGCTGGCAAGTCTACTCTGATC 1228540 Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271 || || || ||||| ||| | ||||| |||| | | |||| ||||| Sbjct 1228541 AACGTGCTCACTGGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATC 1228600 Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331 || || || ||| | |||||||||||| |||||||| |||||||| |||| |||| Sbjct 1228601 CGTATCGCCTACATTAAGCAGCACGCTTTCGCTCACATCGATAACCACCTTGACAAGACT 1228660 Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||| | | ||||| || ||||| | | || | ||| |||||| ||| | |||| || Sbjct 1228661 CCTTCCGAGTACATCCAATGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 1228719 >seq21 Length=1169343 Score = 93.3 bits (102), Expect = 9e-14 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| ||||| || || || |||||||||||||||||||| || | || || || || | Sbjct 29293 AGTTGGTTCCCTTTCTGGAGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCTATGCTCCA 29352 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||||||||| || ||||| || || || || || ||||| | || ||||| | || Sbjct 29353 GCGTGCCGACGTTCTACTTCTGGACGAACCTACTAACCATCTTGATGTTGCCAACATCGC 29412 Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | ||||| | || | | |||||||| |||||| Sbjct 29413 TTGGCTCGAGAACTACCT--CAAGTCTCATCCCGATATCACCAGTCTCATTGTTTCTCAC 29470 Query 279873 GACTCTGGCTTCCTAGA 279889 ||||| || ||||| || Sbjct 29471 GACTCCGGATTCCTGGA 29487 >seq14 Length=298472 Score = 93.3 bits (102), Expect = 9e-14 Identities = 449/699 (64%), Gaps = 15/699 (2%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC-TGTCTTCATAG 293173 ||| | |||||| | |||||||| ||||||||||| | | | || || | | || Sbjct 74336 CTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCG-CTGAG 74278 Query 293174 AGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCT 293233 |||||||||| ||||| |||| ||||||||||| | | | ||| || |||| Sbjct 74277 AGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCT 74218 Query 293234 GGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGA 293292 | || || || | ||||| || |||||||||| | |||||||| || |||| | Sbjct 74217 GAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATG- 74159 Query 293293 GCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGA 293352 | | || || || || | | ||||||||| ||||||||||||||||| || Sbjct 74158 TCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 74099 Query 293353 CGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCA 293412 || ||| || || || ||| ||| ||| ||| || |||||| | Sbjct 74098 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAG 74039 Query 293413 GTAGATGCGGTAGGCATAAGAGC-AGTCGTCAGAGAGTTCCTCACACCCT---TCTTGAC 293468 ||| || ||||||||| |||| || || ||| ||| | | || | ||||||| Sbjct 74038 GTACTGGCAGTAGGCATAGGAGCAAGGAGT-AGACTGTTACGGATGCCGTGTGTCTTGAC 73980 Query 293469 ACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGA 293526 | | ||| || |||||| |||||| ||| || || | || ||| | | Sbjct 73979 TTCCTCTCGAAGAGCCTCCCAGTCCCAGAG--GTCAGAGGGCTTGACGTTCCACATGTCG 73922 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 |||| | ||||||| ||| || || |||| ||||||| | ||| || | ||| Sbjct 73921 AACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCC 73862 Query 293587 TCAGAGAGCTCGCA-AGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACG 293645 | || |||| ||| || || | ||||| |||||| ||| ||||||| Sbjct 73861 TTAGCCAGCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTT 73803 Query 293646 GTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTG 293705 ||||||| ||||||| || || || ||||| ||| | ||| |||| Sbjct 73802 ATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGC 73743 Query 293706 CAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGG 293765 |||||||| ||||| | ||||| ||| || | ||| |||| || | ||||| | Sbjct 73742 AAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTG 73683 Query 293766 AACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTT 293804 || | || ||||||| ||| || ||| |||||| Sbjct 73682 GACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 73644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833678909317