Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq47 113 1e-19 seq34 113 1e-19 seq43 105 2e-17 seq41 95.1 3e-14 >seq47 Length=1426776 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||||| ||| || || || || || || || | | Sbjct 446974 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 446915 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| |||| ||| || || ||| Sbjct 446914 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGG 446855 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || | || || || || |||| ||| || || || Sbjct 446854 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 446795 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 446794 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 446748 Score = 100 bits (110), Expect = 7e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||||| || || || || || || | ||| || || || || Sbjct 447449 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAA 447390 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCA 288397 ||| || ||||||||| || ||| || || || || |||||||| || ||| |||| Sbjct 447389 GATGAGTCGCTGTTGA---TCCGGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCA 447334 Query 288398 CGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 | || || || | |||| || || ||||| || || || ||||| || || || |||| Sbjct 447333 CATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCT 447274 Query 288458 TGACGAATATCTGCAT 288473 ||||||| || ||||| Sbjct 447273 TGACGAAGATTTGCAT 447258 >seq34 Length=1002739 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 516974 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 517033 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || | ||| Sbjct 517034 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 517093 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 517094 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 517153 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 517154 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCAT 517200 >seq43 Length=937570 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 ||| | |||||| | ||| ||| | || ||| | | |||| ||||| | || ||| Sbjct 867516 GAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTC 867457 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232 ||||| || || || || ||||| ||||||||| || | || || || | ||||| Sbjct 867456 ATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG 867397 Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292 || ||||| | | || ||||||| ||| |||||| || || || | || ||||| Sbjct 867396 GTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACC 867337 Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325 ||||||||||| |||||||| |||||| ||| Sbjct 867336 AACTTCTTCGAGAAGCGTGTTGCCGACTACCAA 867304 >seq41 Length=801936 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || || || || | ||| || || ||||||||| Sbjct 757745 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 757804 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||| || || || || |||||||| || | || || || Sbjct 757805 AGTCGCTGTTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 757861 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 757862 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 757921 Query 288463 AA 288464 || Sbjct 757922 AA 757923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650817905686