Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq47 113 1e-19
seq34 113 1e-19
seq43 105 2e-17
seq41 95.1 3e-14
>seq47
Length=1426776
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||||| ||| || || || || || || || | |
Sbjct 446974 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 446915
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||| |||| ||| || || |||
Sbjct 446914 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGG 446855
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || || | || || || || |||| ||| || || ||
Sbjct 446854 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 446795
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 446794 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 446748
Score = 100 bits (110), Expect = 7e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || || || ||||||| || || || || || || | ||| || || || ||
Sbjct 447449 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAA 447390
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCA 288397
||| || ||||||||| || ||| || || || || |||||||| || ||| ||||
Sbjct 447389 GATGAGTCGCTGTTGA---TCCGGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCA 447334
Query 288398 CGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457
| || || || | |||| || || ||||| || || || ||||| || || || ||||
Sbjct 447333 CATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCT 447274
Query 288458 TGACGAATATCTGCAT 288473
||||||| || |||||
Sbjct 447273 TGACGAAGATTTGCAT 447258
>seq34
Length=1002739
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || || ||||| || ||||||
Sbjct 516974 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 517033
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || || ||||| || ||||| || | |||
Sbjct 517034 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 517093
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || ||||| || || | ||| || || ||
Sbjct 517094 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 517153
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||||||||||||| || || ||||||||||| ||||||||
Sbjct 517154 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCAT 517200
>seq43
Length=937570
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172
||| | |||||| | ||| ||| | || ||| | | |||| ||||| | || |||
Sbjct 867516 GAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTC 867457
Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232
||||| || || || || ||||| ||||||||| || | || || || | |||||
Sbjct 867456 ATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG 867397
Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292
|| ||||| | | || ||||||| ||| |||||| || || || | || |||||
Sbjct 867396 GTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACC 867337
Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325
||||||||||| |||||||| |||||| |||
Sbjct 867336 AACTTCTTCGAGAAGCGTGTTGCCGACTACCAA 867304
>seq41
Length=801936
Score = 95.1 bits (104), Expect = 3e-14
Identities = 131/182 (72%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| || || || || || | ||| || || |||||||||
Sbjct 757745 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 757804
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || ||| || || || || |||||||| || | || || ||
Sbjct 757805 AGTCGCTGTTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 757861
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct 757862 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 757921
Query 288463 AA 288464
||
Sbjct 757922 AA 757923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179650817905686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |