Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq43 111 3e-19
seq13 95.1 3e-14
>seq43
Length=937570
Score = 111 bits (122), Expect = 3e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | ||| |||| ||| | || ||| |||| ||
Sbjct 867540 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 867481
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
||| | |||||||||||||| |||||| |||||||| || ||||| || || || |
Sbjct 867480 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 867421
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| ||||| | ||||| || ||||| ||| |||||||| | ||| |||||
Sbjct 867420 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 867361
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
||| || ||| || || || ||||||||||| ||||||||
Sbjct 867360 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 867317
>seq13
Length=1542651
Score = 95.1 bits (104), Expect = 3e-14
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166
|||||| | | ||| | || ||||| ||| || ||||| || ||| | |||| ||
Sbjct 1227921 TCAATGGTGGTCATCTCAGTATCGGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCTTG 1227862
Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225
| | || || |||| |||||| ||| ||| |||| || |||||||| |||||
Sbjct 1227861 ACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGAGT 1227803
Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285
|| || || | ||||| || || || ||||| || || | |||||||| ||| ||
Sbjct 1227802 GGACTTTCCGGAACCGTTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGACGGAG 1227743
Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345
| || | ||| |||||||| || |||| || || ||||| || ||| | || ||
Sbjct 1227742 ATGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAG 1227683
Query 334346 ATCCTCACC 334354
|||||||||
Sbjct 1227682 ATCCTCACC 1227674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102876651035950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |