Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq43 111 3e-19 seq13 95.1 3e-14 >seq43 Length=937570 Score = 111 bits (122), Expect = 3e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | ||| |||| ||| | || ||| |||| || Sbjct 867540 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 867481 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||||||||| |||||| |||||||| || ||||| || || || | Sbjct 867480 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 867421 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| ||||| | ||||| || ||||| ||| |||||||| | ||| ||||| Sbjct 867420 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 867361 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||| || ||| || || || ||||||||||| |||||||| Sbjct 867360 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 867317 >seq13 Length=1542651 Score = 95.1 bits (104), Expect = 3e-14 Identities = 172/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166 |||||| | | ||| | || ||||| ||| || ||||| || ||| | |||| || Sbjct 1227921 TCAATGGTGGTCATCTCAGTATCGGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCTTG 1227862 Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225 | | || || |||| |||||| ||| ||| |||| || |||||||| ||||| Sbjct 1227861 ACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGAGT 1227803 Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285 || || || | ||||| || || || ||||| || || | |||||||| ||| || Sbjct 1227802 GGACTTTCCGGAACCGTTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGACGGAG 1227743 Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345 | || | ||| |||||||| || |||| || || ||||| || ||| | || || Sbjct 1227742 ATGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAG 1227683 Query 334346 ATCCTCACC 334354 ||||||||| Sbjct 1227682 ATCCTCACC 1227674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876651035950