Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq14 212 7e-50 seq43 163 3e-35 >seq14 Length=298472 Score = 212 bits (234), Expect = 7e-50 Identities = 1082/1697 (64%), Gaps = 45/1697 (3%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TG 113646 |||| || || ||||||||||| || |||||||| || |||||||| | | || | || Sbjct 74446 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCAGCC-TGCAAAGTG 74388 Query 113647 CATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706 ||| || | |||| | || || | |||| || ||||| ||||| || Sbjct 74387 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTG 74328 Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 113766 ||| |||||| || ||||| || ||||| | | || | | ||| ||||| Sbjct 74327 ATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCA 74268 Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCC 113826 ||||| | || || ||| | ||| | ||||| | || || || ||||| || Sbjct 74267 AACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC 74208 Query 113827 ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATC 113886 | | | | ||| | | ||||||| | | ||||| ||||| || | || || Sbjct 74207 ATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTC 74148 Query 113887 CTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 113946 || | || |||||||| |||||||| ||||| || | | ||||| Sbjct 74147 CTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGAT 74088 Query 113947 ATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGT 114006 ||||| ||||| ||||| |||||||| ||||| |||| || |||| ||| ||| || Sbjct 74087 ATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGT 74028 Query 114007 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGA 114065 ||||| || || | ||| || |||||||||| || | | | | | | | | || || Sbjct 74027 AGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CTTCCTCTCGA 73970 Query 114066 GG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 114124 | || |||||||| || | | || | | |||||| || |||||||| ||| Sbjct 73969 AGAGCCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAGAATA 73910 Query 114125 CCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT-- 114182 || | ||||| || || |||| || || ||| || ||||| ||| |||| | Sbjct 73909 CCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGC 73850 Query 114183 -CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 114241 ||||| || ||| || |||||||| || |||||||| || | ||| | | Sbjct 73849 ACGGAG---GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGCTCA 73793 Query 114242 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTG 114300 |||||| ||| || || | | || || | || || |||| || ||||| || Sbjct 73792 CGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACCCTG 73734 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 114360 ||||| || ||||| || || || | ||| ||| || ||||| || || || || Sbjct 73733 AACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTA 73674 Query 114361 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 114420 ||| |||||| | | | || || || | ||||||| ||| | || || Sbjct 73673 GTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAG 73614 Query 114421 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC---GATTGA 114477 ||| | | | || | || || ||| || | | | | | | ||||| ||| || Sbjct 73613 CTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGT--TGATGAAGGAGGGCAGAGATAGA 73559 Query 114478 C--GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 114535 || || || || || | | ||| || || |||||| |||||||| || || Sbjct 73558 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 73499 Query 114536 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 114595 | ||| || || ||||| || | ||||||||| || ||| ||| || |||||| Sbjct 73498 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCC 73439 Query 114596 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 114654 ||||| |||||| |||| | || ||||| || |||| || ||||| || | ||| | | Sbjct 73438 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 73379 Query 114655 ATCGGCGGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 114713 || | | || | | | ||| || | ||| ||| |||||||||| ||| || | Sbjct 73378 TTCTGAGCCTTGATCGTCTTGCG-ACCCTTG-CCCGCCTTCTCGTACTTTTCGTACAGAG 73321 Query 114714 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 114773 | || ||||| || || | || | ||| || || || || ||||| | || | Sbjct 73320 CCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTG 73261 Query 114774 ACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833 ||| | ||| || |||||||||||||||||| || || |||||||| || || || Sbjct 73260 TCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGA 73201 Query 114834 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 114893 | || || || || | || || | || || || ||| | || | || || | Sbjct 73200 AAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGA 73141 Query 114894 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGAC 114947 || ||| | |||||| || || ||||| | || | | || | ||| | | | Sbjct 73140 AGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-C 73084 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || |||||| ||||||| || ||| || || || |||||||| |||| || ||| | Sbjct 73083 CACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGT 73024 Query 115008 CAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 ||| || || || || ||| || ||| | | | || | || | || | | Sbjct 73023 TCGATGTACCGTTGGTACCGGCGATGTATGAGCC--AGTAGCACGGATACGGTGCACATT 72966 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || ||||||||| || ||| ||| ||||| || || | ||||| | ||||||| Sbjct 72965 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 72906 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || || || ||| |||| | | | | |||||| |||| ||| ||| || Sbjct 72905 TCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGG 72846 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTA 115243 || || || |||||||| || || | || || ||| | | |||| |||||| Sbjct 72845 GGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGG 72788 Query 115244 TCGTAGGTCTCCAAGAC 115260 | ||| ||||||||||| Sbjct 72787 TTGTATGTCTCCAAGAC 72771 >seq43 Length=937570 Score = 163 bits (180), Expect = 3e-35 Identities = 536/819 (65%), Gaps = 27/819 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| | | | ||| || ||||| Sbjct 867307 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCAT 867366 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| |||| ||| Sbjct 867367 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 867421 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 867422 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 867481 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| ||||| ||||| || | ||| Sbjct 867482 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATA 867541 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | ||||| | | | | || | | || | || | || ||| || |||| Sbjct 867542 TCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCA 867598 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || |||||| ||| || ||| Sbjct 867599 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGC 867658 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | ||||||||| | || | ||| ||||||||| ||| Sbjct 867659 ATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCC 867718 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228 || ||| ||||| |||| |||||| | |||||||| | | | || | | | ||| Sbjct 867719 TCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA-AGAGTCCTTATCTTGGATCCA 867777 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 126287 || ||||| | ||||| || ||| || || | ||||| || || || ||| Sbjct 867778 TCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAG 867837 Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347 || ||| | | || || ||||| || | || ||||| || || || ||| Sbjct 867838 GTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGG 867896 Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406 ||| | | | ||| || | ||| | |||||||| | || || ||| ||||| Sbjct 867897 AGTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGG 867955 Query 126407 ACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 126465 ||||| | | ||| | | || ||||| ||||| ||||| || |||| || Sbjct 867956 ACCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAA 868014 Query 126466 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 126522 || || ||||| | | ||| ||| |||| | ||| || | |||||||| Sbjct 868015 GAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTC 868074 Query 126523 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| ||||| || | |||||| |||||||| Sbjct 868075 GTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCA 868113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351830339960