Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq34 107 2e-18
seq41 89.7 5e-13
seq47 84.2 2e-11
>seq34
Length=1002739
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || || || | |
Sbjct 517007 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 517066
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| ||||| || || || || || ||||| ||| || || |
Sbjct 517067 AAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 517126
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 517127 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTG 517186
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 517187 ACGAAAATCTGCAT 517200
>seq41
Length=801936
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||| | ||| || ||||||||||| ||||| | |||
Sbjct 757743 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 757802
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || |||||||||||||| || || || || ||||| ||| || || | ||||
Sbjct 757803 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 757861
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||| | ||||| ||||||| || | || || || ||||| || || ||
Sbjct 757862 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 757921
Query 138604 AAA 138606
|||
Sbjct 757922 AAA 757924
>seq47
Length=1426776
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| ||||||||||||||| | ||| || ||||| ||||| || || | |
Sbjct 447451 GATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCA 447392
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || |||||||| ||||| || ||||| || ||||| ||| || || |
Sbjct 447391 AAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACA 447332
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| |||| ||||| || || | || | || || ||||| || || ||
Sbjct 447331 TTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTG 447272
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 447271 ACGAAGATTTGCAT 447258
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||||||||| || ||||| |||||||||| || || || || | || ||||| |
Sbjct 447681 TTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAG 447622
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
|||| |||||||| || || || || || || || || || ||| | || | ||
Sbjct 447621 CGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCC-TGAATCTTGCTCTTC 447563
Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| |||| | | ||||| | ||||| ||||| | || | || || ||||| |||||
Sbjct 447562 ACGTTGT-CGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 447504
Query 138597 TTTTACAAAAATCTGCAT 138614
|| || |||||||||||
Sbjct 447503 CTTCACGAAAATCTGCAT 447486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260929822640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |