Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14 170 2e-37 seq43 163 3e-35 >seq14 Length=298472 Score = 170 bits (188), Expect = 2e-37 Identities = 1080/1703 (63%), Gaps = 57/1703 (3%) Strand=Plus/Minus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TG 115607 |||| || || ||||||||||| || |||||||| || |||||||| | | || | || Sbjct 74446 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCAGCC-TGCAAAGTG 74388 Query 115608 CATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 115667 ||| || | |||| | || || | |||| || ||||| ||||| || Sbjct 74387 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTG 74328 Query 115668 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727 ||| |||||| || ||||| || ||||| | | || | | ||| ||||| Sbjct 74327 ATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCA 74268 Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCC 115787 ||||| | || || ||| | ||| | ||||| | || || || || || || Sbjct 74267 AACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC 74208 Query 115788 AC---CTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAG 115844 | | || ||| || | | ||||||| | | ||||| ||||| || | || Sbjct 74207 ATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAG 74151 Query 115845 ATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 115900 |||| | | ||| | |||||||| |||||||| ||||| || | Sbjct 74150 GTCCTTGAGCAGCCAGGGG----TTGACAACCTGGAACTCACCAGCGAGAACACGGCGTT 74095 Query 115901 GATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 115960 | ||||| |||| ||||| ||||| |||||||| ||||| |||| || |||| || Sbjct 74094 GGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTAC 74035 Query 115961 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT 116020 ||| || ||||| || || | ||| || ||||| |||| || | | | | | Sbjct 74034 TGGCAGTAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CTTC 73977 Query 116021 C-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTG 116078 | || || | || |||||||| || | | || | | |||||| || ||||| Sbjct 73976 CTCTCGAAGAGCCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTG 73917 Query 116079 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 116138 ||| ||||| | || || || || |||| || || || || ||||| ||| || Sbjct 73916 GAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGC 73857 Query 116139 CAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195 || | ||||| || ||| || |||||||| || |||||||| || | ||| Sbjct 73856 CAGCTGCACGGAG---GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATT 73800 Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA-AATAAATACATCCGCGA 116254 | | |||||| ||| || || | | || || | || || |||| || | Sbjct 73799 GAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAA 73741 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 116314 |||| || ||||| || ||||| || || || | ||| ||| || ||||| || | Sbjct 73740 GACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGA 73681 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 | || || ||| |||||| | | | || || || | ||||||| ||| | Sbjct 73680 CAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCT 73621 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC-- 116432 || ||||| | | | || | || || ||| || | | | | | | ||||| Sbjct 73620 TGTGCAGCTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGT--TGATGAAGGAGGGCAG 73566 Query 116433 -GATTGAC--GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 ||| || || || || || || | | ||| || || |||||| |||||||| Sbjct 73565 AGATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTC 73506 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 || || | ||| || || ||||| || | ||||||||| || ||| ||| || Sbjct 73505 AGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCA 73446 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 ||||||||||||||||| |||| | || ||||| || |||| || ||||| || | Sbjct 73445 GGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTA 73386 Query 116610 CCATA-CATCGGCGGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 ||| | | || | | || | | | ||| || | ||| ||| |||||||||| | Sbjct 73385 CCAAAGCTTCTGAGCCTTGATCGTCTTGCG-ACCCTTG-CCCGCCTTCTCGTACTTTTCG 73328 Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACA 116726 || || ||||| ||||| || || ||| || | ||| || || || || || || Sbjct 73327 TACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCA 73269 Query 116727 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786 | || | ||| | ||| || |||||| ||||||||||| || || |||||||| || Sbjct 73268 CATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAG 73209 Query 116787 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 116846 || ||| || || || || | || || | || || || ||| | || | Sbjct 73208 GGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAG 73149 Query 116847 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC-CCTTGC-- 116902 || || | || ||| | |||||| || || ||||| | || | | ||| | || Sbjct 73148 GAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT 73089 Query 116903 GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 | | ||| |||||| ||||||| || || ||| || || |||||||| |||| || Sbjct 73088 GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGA 73030 Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020 ||| | ||| || || || || ||| || ||| | | || | || | ||| Sbjct 73029 CACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCC--AGTAGCACGGATACGGTG 72972 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 | | || ||||||||| || ||| ||| ||||| || || | ||||| | | Sbjct 72971 CACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 72912 Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140 |||||| || || || ||| |||| | | | | |||||| |||| ||| || Sbjct 72911 GTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGG 72852 Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGAC 117198 | || || || || |||||||| || || | || || ||| | | |||| ||| Sbjct 72851 CTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGAC 72794 Query 117199 ATCTTATCGTAGGTCTCCAAGAC 117221 ||| | ||| ||||||||||| Sbjct 72793 ATCAGGTTGTATGTCTCCAAGAC 72771 >seq43 Length=937570 Score = 163 bits (180), Expect = 3e-35 Identities = 534/818 (65%), Gaps = 25/818 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||||||||| ||||| || | ||| ||| || ||||| Sbjct 867307 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCAT 867366 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | | || | | | |||| |||| ||| Sbjct 867367 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 867421 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 867422 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 867481 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 ||| || || || || || |||| ||| |||||| || || || | ||| Sbjct 867482 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATA 867541 Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522 | ||||| | | | | || | | || | || | || ||| || ||| Sbjct 867542 TCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CAG-GCA 867598 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||||||||| |||||||| || || |||||| |||||| ||| Sbjct 867599 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGC 867658 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | ||||||||| | || | ||| ||||||||| ||| Sbjct 867659 ATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCC 867718 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702 || ||| ||||| |||| ||||| | ||||||||| | ||| | | ||| Sbjct 867719 TCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCAT 867778 Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAAAGAG 127761 || ||||| | ||||| || ||| || || | ||||| || || || ||| | Sbjct 867779 CGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGG 867838 Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821 | ||| | | || || ||||| || | || ||||| || || || ||| Sbjct 867839 TAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 867897 Query 127822 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 127880 ||| | | | ||| || | ||| | |||||||| | || || ||| ||||| | Sbjct 867898 GTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGA 867956 Query 127881 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939 |||| | | ||| | | || ||||| ||||| ||||| || |||| || Sbjct 867957 CCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 868015 Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 127996 || || ||||| | | ||| ||| |||| | ||| || | ||||||||| Sbjct 868016 AAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCG 868075 Query 127997 TCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | ||||||||| ||||| || | |||||| |||||||| Sbjct 868076 TGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCA 868113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505382484920