Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq43 183 3e-41 seq34 118 1e-21 seq41 111 2e-19 seq47 107 2e-18 >seq43 Length=937570 Score = 183 bits (202), Expect = 3e-41 Identities = 375/552 (68%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| |||||||| || | |||||||| | || ||||| ||||| ||| |||| Sbjct 867592 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 867651 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| || || || |||||||| || || | |||||| || ||||| Sbjct 867652 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAA 867711 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGG 133072 || ||||| || || |||||||| || || || | | | || | | || || || | Sbjct 867712 GATACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTG 867771 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 |||||| || | ||||| || ||||| | | || ||| || || || || ||||||| Sbjct 867772 -GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 867830 Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190 | || || | || ||| || || | | ||||||||||||||| || || Sbjct 867831 TGAA--AAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTA 867888 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | || ||||| | ||||||||| ||| || |||||||| || || || |||||| Sbjct 867889 GGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGG 867948 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | ||| || || | ||| |||||||| || || |||||||| || || || ||| Sbjct 867949 GATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGC 868008 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTC 133367 ||||| || || || | ||| || ||| |||| | | | ||| ||| | Sbjct 868009 AGCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTT 868068 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| | |||||||| ||||| | |||||| | ||||| || || ||||| || Sbjct 868069 CCAGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGC 868128 Query 133428 TTTTTTGTACAT 133439 || |||||||| Sbjct 868129 CTTCTTGTACAT 868140 >seq34 Length=1002739 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| || || || |||||| | || || ||| | Sbjct 517203 AAGATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 517144 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 517143 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 517085 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| | |||||| Sbjct 517084 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 517025 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | || || || |||| || || Sbjct 517024 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCG 516986 >seq41 Length=801936 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 757923 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 757864 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 757863 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGACTG 757804 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || || | || || ||| ||||||||||||||| ||| Sbjct 757803 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 757744 Query 38433 G 38433 | Sbjct 757743 G 757743 >seq47 Length=1426776 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 ||| |||| || || ||||| ||||| |||||||| | || |||||| | |||| | | Sbjct 447036 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACC 447095 Query 38310 GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | | |||| || |||| ||||| ||||| || || | ||||| ||||| Sbjct 447096 ATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGC 447155 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || |||| || || || || ||||| |||| || ||||| ||||||||||||||| Sbjct 447156 CTGATTTTTGCTGGAAAGCAACTGGAAGACGGTCGAACCCTTGCCGACTACAACATCCAG 447215 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| | || || ||| | || || || Sbjct 447216 AAGGAATCTACCCTTCATCTCGTCCTCCG 447244 Score = 104 bits (114), Expect = 2e-17 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || ||||| || | || |||||| | || Sbjct 447258 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 447317 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | | |||| || |||| ||||| ||||| |||||| | || | Sbjct 447318 GATACCATTGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATC 447375 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || ||||| || || || || | || || || |||||||| Sbjct 447376 AACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACA 447435 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || |||||| | || || || ||||||| ||| Sbjct 447436 ACATTCAGAAGGAATCTACTCTCCACCTGGTGCTCCGT 447473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171318238080