Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14 244 1e-59 seq38 104 3e-17 seq43 95.1 1e-14 >seq14 Length=298472 Score = 244 bits (270), Expect = 1e-59 Identities = 1082/1689 (64%), Gaps = 53/1689 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466 ||||| || ||||| || || ||||| ||| |||||| || | || | ||||| | Sbjct 74437 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 74379 Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 || ||| | || || || ||| | ||||| ||||| |||||||| ||||| Sbjct 74378 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 74319 Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582 ||| |||||||| ||||| | || || | | ||| | | ||||| |||| Sbjct 74318 GGCACCTCGATCAGCAGCCATCTGGACGA----CCTGGCGCTGAGAGATCTCCCAAACAG 74263 Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639 |||| |||| | ||||| ||| | || |||| ||||| ||||| || ||| Sbjct 74262 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 74203 Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699 |||| | | || | | |||||| | | ||||| ||||| | | | || | || Sbjct 74202 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 74149 Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756 | || || | ||||| || || |||||||| || || || |||||| Sbjct 74148 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGA 74089 Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816 | || | |||||||| ||||| ||||| |||||||| || || || | || || | Sbjct 74088 TATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 74029 Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876 | ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || | Sbjct 74028 TAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 73969 Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 || ||||| || | | || | || | | |||||| || || | Sbjct 73968 GAGCCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 73915 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | |||||||| || || ||||||||||| | ||| | ||||| ||| |||| Sbjct 73914 GAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 73855 Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055 || | | | || | | || || || ||||| || |||||||| || || ||| | Sbjct 73854 GCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGC 73796 Query 110056 AGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACC 110114 |||| ||| | |||||||| | | || || || || |||| || ||||| Sbjct 73795 TCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACC 73737 Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGG 110174 ||||||||| ||||||||||| || || ||||||| | ||||| | || || Sbjct 73736 CTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGG 73677 Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATG 110234 ||| ||| ||||||| | || || || | ||| || ||| | || Sbjct 73676 GTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTG 73617 Query 110235 GAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAATAG 110293 || || | | | ||| | | | || | || |||| | ||| |||| | || Sbjct 73616 CAGCTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAGATAGAG 73558 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | ||||| ||||| || | |||||| | | ||| || | |||||| || || | Sbjct 73557 AGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 73498 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 ||||| || ||| ||| | |||||| || || ||| |||||| ||||||| Sbjct 73497 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCT 73438 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472 | ||||||||| ||||| | || || || ||||| | || |||||||| | ||| | | Sbjct 73437 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 73378 Query 110473 TCGGCGGCGGGGACAG-TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || | | | | | ||||| | | || ||| ||||||||| ||||| | Sbjct 73377 TCTGAGCCTTGATCGTCTTGCG--ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 73320 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||| || |||| |||||| || | || || || | ||| || | || | Sbjct 73319 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 73260 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | || || |||||| | ||||||||| || ||||| ||||| | || ||| Sbjct 73259 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 73200 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 |||||||||| ||| |||| || | ||| ||||| || || || | || || | Sbjct 73199 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 73140 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACGACC 110765 || ||| |||||||| || ||||| ||| | ||| || || ||| | | || Sbjct 73139 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-CC 73083 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 |||||| ||||| || || ||| |||||||| | |||||||||| | || | Sbjct 73082 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTT 73023 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 ||| ||| || ||||| || || | | ||||| || ||| | || || Sbjct 73022 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAG 72963 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944 |||||||||||| ||| ||| || ||||| ||| |||| ||| | || || | Sbjct 72962 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGATTC 72904 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | ||||| || |||| | ||| | |||||||| |||| || || |||| | Sbjct 72903 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 72844 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTT 111062 | || ||||||||||| || || | ||||| ||| ||| |||| |||||| ||| Sbjct 72843 TGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGGTT 72786 Query 111063 GTATGTGTC 111071 |||||| || Sbjct 72785 GTATGTCTC 72777 >seq38 Length=1878319 Score = 104 bits (114), Expect = 3e-17 Identities = 307/464 (66%), Gaps = 22/464 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || ||||| || | | || | || || ||||| | || || || | Sbjct 662708 CGGTCGAACCGCCCTGGTCGCATCAAGGCTTTGTCGAGCATATCCGCTCGATTAGTGCCA 662767 Query 11563 GCAATGACTACAATGCCAG-TCTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 |||| || |||| || | || | | | | ||||||||||||||| ||||||| ||||| Sbjct 662768 GCAAGAACAACAA--CCTGCTCGCGAGTATTGAAACCGTCCATTTCAGTGAGAATCTGGT 662825 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCTTACCG 11679 | | || ||| |||||||||||| | | || || | |||| | | | | | Sbjct 662826 TCAGAGTTGCTTCCCGCTCATCGTTGCCACCGAATCCC--CGGCCGCTCTCCTGTCGCGC 662883 Query 11680 ACA-------GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 || |||||||||||||| ||||| | ||| || || ||| |||| | | Sbjct 662884 ACGTCCAATTGCGTCAATCTCATCAATGAAGATGATGCAAGGGGCGTTCTTACGTCCTTC 662943 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| | || | ||||| | || ||||| ||||||||||||||||| | | Sbjct 662944 GGCGAACAAATCTCTCACACGTGAAGGACCGACACCGACGAACATCTCAACGAACTCAGA 663003 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | | |||||||| ||| || || |||||| || || |||| || || | | Sbjct 663004 GCCGCTCACACTGAA-GAATGGTACTCCAGACTCGCCGGCTGTGGCCTTGGCAAGTAATG 663062 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908 |||| || ||||| || | ||||| | | || || ||||||||||||||||| Sbjct 663063 TCTTGCCAGTACCCGGGGGGCCAGCTAAGATAGCACCTCGGGGGATCTTGGCACCGAGCT 663122 Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || | || | ||| |||| ||| |||||| ||||| |||| Sbjct 663123 TTTCGAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 663163 >seq43 Length=937570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 366/559 (65%), Gaps = 16/559 (3%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || || || |||||||||||||| ||| |||| || || Sbjct 867595 GGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACC 867654 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| || || | || ||| |||||||| Sbjct 867655 AGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGAT 867714 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 ||||| ||| |||||||| | ||||| | || ||||| ||| ||| || || Sbjct 867715 ACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGC-AAAGGAAGAGTCCTTATCTTGGA 867773 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCG 119729 ||| || ||||||| ||||| | || |||||||| | || | ||||| | | Sbjct 867774 TCCATCGGATGGCCCAGTCAGCCTT-CTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 867832 Query 119730 AAAA-GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 |||| || | ||| | || ||||| ||||| | || ||||| |||||||| Sbjct 867833 AAAAGGTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGT 867891 Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 ||| |||| | | ||| || ||| || | || || | ||||| |||| | Sbjct 867892 CTCGGAGTGAATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 867950 Query 119848 TTTGCACTTCGTCAGCAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | || || ||| || | ||| | | | || || || ||||| ||||| || || Sbjct 867951 TCTGGACCTCGCCA-CTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCA 868009 Query 119907 GCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTC 119963 |||||||| || | ||||| | ||| ||| |||| | | || ||| ||| Sbjct 868010 GCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTC 868069 Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCC 120023 ||||||| | ||| || || | ||| | ||| ||||| |||||| || || ||| Sbjct 868070 CAGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 868129 Query 120024 TTTTTATAGAGTTCCCAAA 120042 || || || | || ||||| Sbjct 868130 TTCTTGTACATTTGCCAAA 868148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974255158600