Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq14 244 1e-59
seq38 104 3e-17
seq43 95.1 1e-14
>seq14
Length=298472
Score = 244 bits (270), Expect = 1e-59
Identities = 1082/1689 (64%), Gaps = 53/1689 (3%)
Strand=Plus/Minus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466
||||| || ||||| || || ||||| ||| |||||| || | || | ||||| |
Sbjct 74437 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 74379
Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
|| ||| | || || || ||| | ||||| ||||| |||||||| |||||
Sbjct 74378 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 74319
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582
||| |||||||| ||||| | || || | | ||| | | ||||| ||||
Sbjct 74318 GGCACCTCGATCAGCAGCCATCTGGACGA----CCTGGCGCTGAGAGATCTCCCAAACAG 74263
Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639
|||| |||| | ||||| ||| | || |||| ||||| ||||| || |||
Sbjct 74262 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 74203
Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699
|||| | | || | | |||||| | | ||||| ||||| | | | || | ||
Sbjct 74202 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 74149
Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756
| || || | ||||| || || |||||||| || || || ||||||
Sbjct 74148 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGA 74089
Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816
| || | |||||||| ||||| ||||| |||||||| || || || | || || |
Sbjct 74088 TATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 74029
Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876
| ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || |
Sbjct 74028 TAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 73969
Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936
|| ||||| || | | || | || | | |||||| || || |
Sbjct 73968 GAGCCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 73915
Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996
| | |||||||| || || ||||||||||| | ||| | ||||| ||| ||||
Sbjct 73914 GAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 73855
Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055
|| | | | || | | || || || ||||| || |||||||| || || ||| |
Sbjct 73854 GCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGC 73796
Query 110056 AGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACC 110114
|||| ||| | |||||||| | | || || || || |||| || |||||
Sbjct 73795 TCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACC 73737
Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGG 110174
||||||||| ||||||||||| || || ||||||| | ||||| | || ||
Sbjct 73736 CTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGG 73677
Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATG 110234
||| ||| ||||||| | || || || | ||| || ||| | ||
Sbjct 73676 GTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTG 73617
Query 110235 GAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAATAG 110293
|| || | | | ||| | | | || | || |||| | ||| |||| | ||
Sbjct 73616 CAGCTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAGATAGAG 73558
Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353
| ||||| ||||| || | |||||| | | ||| || | |||||| || || |
Sbjct 73557 AGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 73498
Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413
||||| || ||| ||| | |||||| || || ||| |||||| |||||||
Sbjct 73497 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCT 73438
Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472
| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| | |
Sbjct 73437 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 73378
Query 110473 TCGGCGGCGGGGACAG-TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531
|| | | | | | ||||| | | || ||| ||||||||| ||||| |
Sbjct 73377 TCTGAGCCTTGATCGTCTTGCG--ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 73320
Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591
||| || |||| |||||| || | || || || | ||| || | || |
Sbjct 73319 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 73260
Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651
||| | || || |||||| | ||||||||| || ||||| ||||| | || |||
Sbjct 73259 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 73200
Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711
|||||||||| ||| |||| || | ||| ||||| || || || | || || |
Sbjct 73199 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 73140
Query 110712 GATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACGACC 110765
|| ||| |||||||| || ||||| ||| | ||| || || ||| | | ||
Sbjct 73139 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-CC 73083
Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825
|||||| ||||| || || ||| |||||||| | |||||||||| | || |
Sbjct 73082 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTT 73023
Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885
||| ||| || ||||| || || | | ||||| || ||| | || ||
Sbjct 73022 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAG 72963
Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944
|||||||||||| ||| ||| || ||||| ||| |||| ||| | || || |
Sbjct 72962 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGATTC 72904
Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004
| ||||| || |||| | ||| | |||||||| |||| || || |||| |
Sbjct 72903 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 72844
Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTT 111062
| || ||||||||||| || || | ||||| ||| ||| |||| |||||| |||
Sbjct 72843 TGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGGTT 72786
Query 111063 GTATGTGTC 111071
|||||| ||
Sbjct 72785 GTATGTCTC 72777
>seq38
Length=1878319
Score = 104 bits (114), Expect = 3e-17
Identities = 307/464 (66%), Gaps = 22/464 (5%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| ||||| || ||||| || | | || | || || ||||| | || || || |
Sbjct 662708 CGGTCGAACCGCCCTGGTCGCATCAAGGCTTTGTCGAGCATATCCGCTCGATTAGTGCCA 662767
Query 11563 GCAATGACTACAATGCCAG-TCTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|||| || |||| || | || | | | | ||||||||||||||| ||||||| |||||
Sbjct 662768 GCAAGAACAACAA--CCTGCTCGCGAGTATTGAAACCGTCCATTTCAGTGAGAATCTGGT 662825
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCTTACCG 11679
| | || ||| |||||||||||| | | || || | |||| | | | | |
Sbjct 662826 TCAGAGTTGCTTCCCGCTCATCGTTGCCACCGAATCCC--CGGCCGCTCTCCTGTCGCGC 662883
Query 11680 ACA-------GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
|| |||||||||||||| ||||| | ||| || || ||| |||| | |
Sbjct 662884 ACGTCCAATTGCGTCAATCTCATCAATGAAGATGATGCAAGGGGCGTTCTTACGTCCTTC 662943
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
|||| | || | ||||| | || ||||| ||||||||||||||||| | |
Sbjct 662944 GGCGAACAAATCTCTCACACGTGAAGGACCGACACCGACGAACATCTCAACGAACTCAGA 663003
Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| | |||||||| ||| || || |||||| || || |||| || || | |
Sbjct 663004 GCCGCTCACACTGAA-GAATGGTACTCCAGACTCGCCGGCTGTGGCCTTGGCAAGTAATG 663062
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908
|||| || ||||| || | ||||| | | || || |||||||||||||||||
Sbjct 663063 TCTTGCCAGTACCCGGGGGGCCAGCTAAGATAGCACCTCGGGGGATCTTGGCACCGAGCT 663122
Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
|| | || | ||| |||| ||| |||||| ||||| ||||
Sbjct 663123 TTTCGAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 663163
>seq43
Length=937570
Score = 95.1 bits (104), Expect = 1e-14
Identities = 366/559 (65%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || ||||| || || || |||||||||||||| ||| |||| || ||
Sbjct 867595 GGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACC 867654
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||| || | ||||| ||||| || || | || ||| ||||||||
Sbjct 867655 AGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGAT 867714
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670
||||| ||| |||||||| | ||||| | || ||||| ||| ||| || ||
Sbjct 867715 ACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGC-AAAGGAAGAGTCCTTATCTTGGA 867773
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCG 119729
||| || ||||||| ||||| | || |||||||| | || | ||||| | |
Sbjct 867774 TCCATCGGATGGCCCAGTCAGCCTT-CTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 867832
Query 119730 AAAA-GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
|||| || | ||| | || ||||| ||||| | || ||||| ||||||||
Sbjct 867833 AAAAGGTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGT 867891
Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847
||| |||| | | ||| || ||| || | || || | ||||| |||| |
Sbjct 867892 CTCGGAGTGAATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 867950
Query 119848 TTTGCACTTCGTCAGCAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906
| || || ||| || | ||| | | | || || || ||||| ||||| || ||
Sbjct 867951 TCTGGACCTCGCCA-CTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCA 868009
Query 119907 GCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTC 119963
|||||||| || | ||||| | ||| ||| |||| | | || ||| |||
Sbjct 868010 GCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTC 868069
Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCC 120023
||||||| | ||| || || | ||| | ||| ||||| |||||| || || |||
Sbjct 868070 CAGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 868129
Query 120024 TTTTTATAGAGTTCCCAAA 120042
|| || || | || |||||
Sbjct 868130 TTCTTGTACATTTGCCAAA 868148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974255158600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |