Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq14 196 6e-45
seq43 109 6e-19
seq7 87.8 2e-12
>seq14
Length=298472
Score = 196 bits (216), Expect = 6e-45
Identities = 540/812 (67%), Gaps = 27/812 (3%)
Strand=Plus/Minus
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | |||||| || || | ||||| || || || || | |||||||||||
Sbjct 73520 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 73461
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||| |||||| |||||||||||||||||| | || | || ||||| ||||| |
Sbjct 73460 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 73401
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCT 106682
|| ||||| || | ||| | | || | | || | || | ||| | || | |||
Sbjct 73400 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCG 73345
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| |||||||||| ||| || || || |||||||| || ||||| ||| || |
Sbjct 73344 CCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAG 73285
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| || | || || | ||| | ||| | ||| || |||||| |||||||||||||
Sbjct 73284 GGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAA 73225
Query 106803 GGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTG 106860
| || || ||||| |||| | | ||| || || | ||| || |||| || | ||| ||
Sbjct 73224 GATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTG 73167
Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920
||| || | ||||||||||| | || ||| | |||||| ||||| || |||| ||
Sbjct 73166 GTTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGC 73107
Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| || || ||| ||| | || | ||||| || || ||| ||| || ||
Sbjct 73106 AAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 73047
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTA 107035
|||||||| |||| | ||| | ||| ||| || || || ||| || ||| |
Sbjct 73046 ACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCA 72989
Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095
| || | | | || | | || |||||||| |||||| ||| ||||| |||
Sbjct 72988 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 72929
Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155
|| | | ||||| | ||||| || | || ||| ||||| | | | | ||||
Sbjct 72928 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 72869
Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTG 107211
||| |||| || || || || || ||||||||||| || || | ||||||
Sbjct 72868 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 72809
Query 107212 AATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271
|| |||| | | | |||||| || ||||||||||||||| || || || || ||
Sbjct 72808 AA-GAACTTGCTT---GACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACC 72753
Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303
||| || | | ||||||||| | |||||
Sbjct 72752 CCAGATACCAACAGACACACGCATGATCATGT 72721
>seq43
Length=937570
Score = 109 bits (120), Expect = 6e-19
Identities = 300/457 (66%), Gaps = 16/457 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| |||||||||||
Sbjct 867308 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 867367
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| || || || | || || | | | | || |||| ||||
Sbjct 867368 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 867422
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
||||||| | || |||||||||||| ||| ||||||||||| |||| ||
Sbjct 867423 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 867482
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| || || || || || |||| | | ||||| || || || | | |||
Sbjct 867483 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 867542
Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| || || | | | ||| | | || | || | || ||| || |||||
Sbjct 867543 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 867599
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| |||||||| || || || || || || || |||||| || || ||||
Sbjct 867600 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 867659
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
||||||| |||||||| | ||| |||||| | ||| | || ||||||||||||||
Sbjct 867660 TGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 867719
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434
| ||| || || |||| || || | ||| |||||
Sbjct 867720 CAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA 867756
>seq7
Length=566322
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || ||||| ||||||||| |||||| ||| | || || |
Sbjct 308535 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 308476
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || ||| | ||||| ||| | |||||||| || ||
Sbjct 308475 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 308416
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 308415 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 308363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979052181880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |